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0625854895
...
de42499444
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@ -1,312 +0,0 @@
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use std::collections::HashSet;
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use std::str::FromStr;
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use js_sys::Array;
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use lazy_static::lazy_static;
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use regex::Regex;
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use wasm_bindgen::{prelude::*, JsCast, JsValue};
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use web_sys::{
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Blob, FileReader, HtmlAnchorElement, HtmlButtonElement, HtmlDialogElement, HtmlElement,
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HtmlFormElement, HtmlInputElement, HtmlOptionElement, HtmlSelectElement, Url,
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};
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use yew::prelude::*;
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use yewdux::prelude::*;
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use crate::components::states::{CurrentTransfer, MainState};
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use crate::components::transfer_menu::letters_to_num;
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use crate::data::transfer::Transfer;
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use crate::data::transfer_region::{Region, TransferRegion};
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use crate::data::csv::{state_to_csv, TransferRecord};
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use super::main_window_callbacks::create_close_button;
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type NoParamsCallback = Box<dyn Fn(()) -> ()>;
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pub fn import_transfer_csv_input_callback(
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main_dispatch: Dispatch<MainState>,
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modal: HtmlDialogElement,
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) -> Closure<dyn FnMut(Event)> {
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Closure::<dyn FnMut(_)>::new(move |e: Event| {
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if let Some(input) = e.current_target() {
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let input = input
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.dyn_into::<HtmlInputElement>()
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.expect("We know this is an input.");
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if let Some(files) = input.files() {
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if let Some(file) = files.get(0) {
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let fr = web_sys::FileReader::new().unwrap();
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fr.read_as_text(&file).unwrap();
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let fr1 = fr.clone(); // Clone to avoid outliving closure
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let main_dispatch = main_dispatch.clone(); // Clone to satisfy FnMut
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// trait
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let modal = modal.clone();
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let onload = import_transfer_csv_onload_callback(main_dispatch, fr1, modal);
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fr.set_onload(Some(onload.as_ref().unchecked_ref()));
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onload.forget(); // Magic (don't touch)
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}
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}
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}
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})
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}
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pub fn import_transfer_csv_callback(main_dispatch: Dispatch<MainState>) -> Callback<MouseEvent> {
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Callback::from(move |_| {
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let window = web_sys::window().unwrap();
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let document = window.document().unwrap();
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let body = document.body().unwrap();
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let modal = document
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.create_element("dialog")
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.unwrap()
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.dyn_into::<HtmlDialogElement>()
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.unwrap();
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modal.set_text_content(Some("Import File:"));
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let onclose_callback = {
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let modal = modal.clone();
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Closure::<dyn FnMut(_)>::new(move |_: Event| {
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modal.remove();
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})
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};
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modal.set_onclose(Some(onclose_callback.as_ref().unchecked_ref()));
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let close_button = create_close_button(&onclose_callback);
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onclose_callback.forget();
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modal.append_child(&close_button).unwrap();
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let form = document
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.create_element("form")
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.unwrap()
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.dyn_into::<HtmlFormElement>()
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.unwrap();
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let input = document
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.create_element("input")
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.unwrap()
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.dyn_into::<HtmlInputElement>()
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.unwrap();
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input.set_type("file");
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input.set_accept(".csv");
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form.append_child(&input).unwrap();
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let input_callback = {
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let main_dispatch = main_dispatch.clone();
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let modal = modal.clone();
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import_transfer_csv_input_callback(main_dispatch, modal)
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};
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input.set_onchange(Some(input_callback.as_ref().unchecked_ref()));
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input_callback.forget(); // Magic straight from the docs, don't touch :(
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modal.append_child(&form).unwrap();
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body.append_child(&modal).unwrap();
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modal.show_modal().unwrap();
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})
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}
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pub fn import_transfer_csv_onload_callback(
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main_dispatch: Dispatch<MainState>,
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file_reader: FileReader,
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modal: HtmlDialogElement,
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) -> Closure<dyn FnMut(Event)> {
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Closure::<dyn FnMut(_)>::new(move |_: Event| {
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if let Some(value) = &file_reader.result().ok().and_then(|v| v.as_string()) {
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let (header, data) = value.split_at(value.find("\n").unwrap());
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let modified: String = header.to_lowercase() + data;
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log::info!("{}", modified);
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let mut rdr = csv::Reader::from_reader(value.as_bytes());
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let mut records = Vec::new();
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for record in rdr.deserialize::<crate::data::csv::TransferRecord>() {
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match record {
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Ok(r) => {
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//log::debug!("{:?}", r);
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records.push(r);
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}
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Err(e) => {
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log::debug!("{:?}", e);
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}
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}
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}
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let mut sources: HashSet<String> = HashSet::new();
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let mut destinations: HashSet<String> = HashSet::new();
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for record in records.iter() {
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sources.insert(record.source_plate.clone());
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destinations.insert(record.destination_plate.clone());
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}
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let window = web_sys::window().unwrap();
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let document = window.document().unwrap();
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let form = document
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.create_element("form")
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.unwrap()
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.dyn_into::<HtmlFormElement>()
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.unwrap();
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let from_source = document
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.create_element("select")
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.unwrap()
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.dyn_into::<HtmlSelectElement>()
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.unwrap();
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for source in sources {
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let option = document
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.create_element("option")
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.unwrap()
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.dyn_into::<HtmlOptionElement>()
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.unwrap();
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option.set_value(&source);
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option.set_text(&source);
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from_source.append_child(&option).unwrap();
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}
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let to_source = document
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.create_element("select")
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.unwrap()
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.dyn_into::<HtmlSelectElement>()
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.unwrap();
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for source in &main_dispatch.get().source_plates {
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let option = document
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.create_element("option")
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.unwrap()
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.dyn_into::<HtmlOptionElement>()
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.unwrap();
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option.set_value(&source.name);
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option.set_text(&source.name);
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to_source.append_child(&option).unwrap();
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}
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let from_dest = document
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.create_element("select")
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.unwrap()
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.dyn_into::<HtmlSelectElement>()
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.unwrap();
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for dest in destinations {
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let option = document
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.create_element("option")
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.unwrap()
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.dyn_into::<HtmlOptionElement>()
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.unwrap();
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option.set_value(&dest);
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option.set_text(&dest);
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from_dest.append_child(&option).unwrap();
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}
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let to_dest = document
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.create_element("select")
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.unwrap()
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.dyn_into::<HtmlSelectElement>()
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.unwrap();
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for dest in &main_dispatch.get().destination_plates {
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let option = document
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.create_element("option")
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.unwrap()
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.dyn_into::<HtmlOptionElement>()
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.unwrap();
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option.set_value(&dest.name);
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option.set_text(&dest.name);
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to_dest.append_child(&option).unwrap();
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}
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let submit = document
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.create_element("button")
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.unwrap()
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.dyn_into::<HtmlButtonElement>()
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.unwrap();
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submit.set_value("Submit");
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submit.set_inner_text("Submit");
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let submit_callback = {
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let main_dispatch = main_dispatch.clone();
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let from_source = from_source.clone();
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let to_source = to_source.clone();
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let from_dest = from_dest.clone();
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let to_dest = to_dest.clone();
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import_transfer_csv_submit_callback(
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main_dispatch,
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from_source,
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to_source,
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from_dest,
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to_dest,
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records,
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)
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};
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submit.set_onclick(Some(submit_callback.as_ref().unchecked_ref()));
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submit_callback.forget();
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form.append_child(&from_source).unwrap();
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form.append_child(&to_source).unwrap();
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form.append_child(&from_dest).unwrap();
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form.append_child(&to_dest).unwrap();
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modal.append_child(&submit).unwrap();
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modal.append_child(&form).unwrap();
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}
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})
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}
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pub fn import_transfer_csv_submit_callback(
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main_dispatch: Dispatch<MainState>,
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from_source: HtmlSelectElement,
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to_source: HtmlSelectElement,
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from_dest: HtmlSelectElement,
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to_dest: HtmlSelectElement,
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records: Vec<TransferRecord>,
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) -> Closure<dyn FnMut(Event)> {
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Closure::<dyn FnMut(_)>::new(move |_: Event| {
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let from_source = from_source.value();
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let to_source = to_source.value();
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let from_dest = from_dest.value();
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let to_dest = to_dest.value();
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lazy_static! {
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static ref REGEX: Regex = Regex::new(r"([A-Z,a-z]+)(\d+)").unwrap();
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}
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let records: Vec<((u8, u8), (u8, u8))> = records
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.iter()
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.filter(|record| record.source_plate == from_source)
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.filter(|record| record.destination_plate == from_dest)
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.map(|record| {
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let c1 = REGEX.captures(&record.source_well).unwrap();
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let c2 = REGEX.captures(&record.destination_well).unwrap();
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log::debug!("{} {}", &record.source_well, &record.destination_well);
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log::debug!("{},{} {},{}", &c1[1], &c1[2], &c2[1], &c2[2]);
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(
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(
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letters_to_num(&c1[1]).unwrap(),
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c1[2].parse::<u8>().unwrap(),
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),
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(
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letters_to_num(&c2[1]).unwrap(),
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c2[2].parse::<u8>().unwrap(),
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),
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)
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})
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.collect();
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let spi = main_dispatch
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.get()
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.source_plates
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.iter()
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.find(|src| src.name == to_source)
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.unwrap()
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.clone();
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let dpi = main_dispatch
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.get()
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.destination_plates
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.iter()
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.find(|dest| dest.name == to_dest)
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.unwrap()
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.clone();
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let custom_region = Region::new_custom(&records);
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let transfer_region = TransferRegion {
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source_region: custom_region.clone(),
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dest_region: custom_region,
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interleave_source: (1, 1),
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interleave_dest: (1, 1),
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source_plate: spi.plate,
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dest_plate: dpi.plate,
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};
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let transfer = Transfer::new(spi, dpi, transfer_region, "Custom Transfer".to_string());
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main_dispatch.reduce_mut(|state| {
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state.transfers.push(transfer);
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state.selected_transfer = state
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.transfers
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.last()
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.expect("An element should have just been added")
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.get_uuid();
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});
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})
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}
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|
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@ -22,7 +22,7 @@ use crate::data::csv::{state_to_csv, TransferRecord};
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type NoParamsCallback = Box<dyn Fn(()) -> ()>;
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pub fn create_close_button(close: &Closure<dyn FnMut(Event)>) -> HtmlElement {
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fn create_close_button(close: &Closure<dyn FnMut(Event)>) -> HtmlElement {
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let document = web_sys::window().unwrap().document().unwrap();
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let close_button = document
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.create_element("button")
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|
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@ -216,10 +216,287 @@ pub fn import_json_button_callback(main_dispatch: Dispatch<MainState>) -> Callba
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})
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}
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pub use super::import_csv_callbacks::import_transfer_csv_callback;
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pub fn import_transfer_csv_submit_callback(
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main_dispatch: Dispatch<MainState>,
|
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from_source: HtmlSelectElement,
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to_source: HtmlSelectElement,
|
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from_dest: HtmlSelectElement,
|
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to_dest: HtmlSelectElement,
|
||||
records: Vec<TransferRecord>,
|
||||
) -> Closure<dyn FnMut(Event)> {
|
||||
Closure::<dyn FnMut(_)>::new(move |_: Event| {
|
||||
let from_source = from_source.value();
|
||||
let to_source = to_source.value();
|
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let from_dest = from_dest.value();
|
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let to_dest = to_dest.value();
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|
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pub use super::import_csv_callbacks::import_transfer_csv_submit_callback;
|
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lazy_static! {
|
||||
static ref REGEX: Regex = Regex::new(r"([A-Z]+)(\d+)").unwrap();
|
||||
}
|
||||
let records: Vec<((u8, u8), (u8, u8))> = records
|
||||
.iter()
|
||||
.filter(|record| record.source_plate == from_source)
|
||||
.filter(|record| record.destination_plate == from_dest)
|
||||
.map(|record| {
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let c1 = REGEX.captures(&record.source_well).unwrap();
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let c2 = REGEX.captures(&record.destination_well).unwrap();
|
||||
log::debug!("{} {}", &record.source_well, &record.destination_well);
|
||||
log::debug!("{},{} {},{}", &c1[1], &c1[2], &c2[1], &c2[2]);
|
||||
|
||||
pub use super::import_csv_callbacks::import_transfer_csv_onload_callback;
|
||||
(
|
||||
(
|
||||
letters_to_num(&c1[1]).unwrap(),
|
||||
c1[2].parse::<u8>().unwrap(),
|
||||
),
|
||||
(
|
||||
letters_to_num(&c2[1]).unwrap(),
|
||||
c2[2].parse::<u8>().unwrap(),
|
||||
),
|
||||
)
|
||||
})
|
||||
.collect();
|
||||
|
||||
let spi = main_dispatch
|
||||
.get()
|
||||
.source_plates
|
||||
.iter()
|
||||
.find(|src| src.name == to_source)
|
||||
.unwrap()
|
||||
.clone();
|
||||
let dpi = main_dispatch
|
||||
.get()
|
||||
.destination_plates
|
||||
.iter()
|
||||
.find(|dest| dest.name == to_dest)
|
||||
.unwrap()
|
||||
.clone();
|
||||
|
||||
let custom_region = Region::new_custom(&records);
|
||||
let transfer_region = TransferRegion {
|
||||
source_region: custom_region.clone(),
|
||||
dest_region: custom_region,
|
||||
interleave_source: (1, 1),
|
||||
interleave_dest: (1, 1),
|
||||
source_plate: spi.plate,
|
||||
dest_plate: dpi.plate,
|
||||
};
|
||||
|
||||
let transfer = Transfer::new(spi, dpi, transfer_region, "Custom Transfer".to_string());
|
||||
main_dispatch.reduce_mut(|state| {
|
||||
state.transfers.push(transfer);
|
||||
state.selected_transfer = state
|
||||
.transfers
|
||||
.last()
|
||||
.expect("An element should have just been added")
|
||||
.get_uuid();
|
||||
});
|
||||
})
|
||||
}
|
||||
|
||||
pub fn import_transfer_csv_onload_callback(
|
||||
main_dispatch: Dispatch<MainState>,
|
||||
file_reader: FileReader,
|
||||
modal: HtmlDialogElement,
|
||||
) -> Closure<dyn FnMut(Event)> {
|
||||
Closure::<dyn FnMut(_)>::new(move |_: Event| {
|
||||
if let Some(value) = &file_reader.result().ok().and_then(|v| v.as_string()) {
|
||||
let mut rdr = csv::Reader::from_reader(value.as_bytes());
|
||||
let mut records = Vec::new();
|
||||
for record in rdr.deserialize::<crate::data::csv::TransferRecord>() {
|
||||
match record {
|
||||
Ok(r) => {
|
||||
//log::debug!("{:?}", r);
|
||||
records.push(r);
|
||||
}
|
||||
Err(e) => {
|
||||
log::debug!("{:?}", e);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
let mut sources: HashSet<String> = HashSet::new();
|
||||
let mut destinations: HashSet<String> = HashSet::new();
|
||||
for record in records.iter() {
|
||||
sources.insert(record.source_plate.clone());
|
||||
destinations.insert(record.destination_plate.clone());
|
||||
}
|
||||
|
||||
let window = web_sys::window().unwrap();
|
||||
let document = window.document().unwrap();
|
||||
let form = document
|
||||
.create_element("form")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlFormElement>()
|
||||
.unwrap();
|
||||
let from_source = document
|
||||
.create_element("select")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlSelectElement>()
|
||||
.unwrap();
|
||||
for source in sources {
|
||||
let option = document
|
||||
.create_element("option")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlOptionElement>()
|
||||
.unwrap();
|
||||
option.set_value(&source);
|
||||
option.set_text(&source);
|
||||
from_source.append_child(&option).unwrap();
|
||||
}
|
||||
let to_source = document
|
||||
.create_element("select")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlSelectElement>()
|
||||
.unwrap();
|
||||
for source in &main_dispatch.get().source_plates {
|
||||
let option = document
|
||||
.create_element("option")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlOptionElement>()
|
||||
.unwrap();
|
||||
option.set_value(&source.name);
|
||||
option.set_text(&source.name);
|
||||
to_source.append_child(&option).unwrap();
|
||||
}
|
||||
let from_dest = document
|
||||
.create_element("select")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlSelectElement>()
|
||||
.unwrap();
|
||||
for dest in destinations {
|
||||
let option = document
|
||||
.create_element("option")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlOptionElement>()
|
||||
.unwrap();
|
||||
option.set_value(&dest);
|
||||
option.set_text(&dest);
|
||||
from_dest.append_child(&option).unwrap();
|
||||
}
|
||||
let to_dest = document
|
||||
.create_element("select")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlSelectElement>()
|
||||
.unwrap();
|
||||
for dest in &main_dispatch.get().destination_plates {
|
||||
let option = document
|
||||
.create_element("option")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlOptionElement>()
|
||||
.unwrap();
|
||||
option.set_value(&dest.name);
|
||||
option.set_text(&dest.name);
|
||||
to_dest.append_child(&option).unwrap();
|
||||
}
|
||||
let submit = document
|
||||
.create_element("button")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlButtonElement>()
|
||||
.unwrap();
|
||||
submit.set_value("Submit");
|
||||
submit.set_inner_text("Submit");
|
||||
let submit_callback = {
|
||||
let main_dispatch = main_dispatch.clone();
|
||||
let from_source = from_source.clone();
|
||||
let to_source = to_source.clone();
|
||||
let from_dest = from_dest.clone();
|
||||
let to_dest = to_dest.clone();
|
||||
import_transfer_csv_submit_callback(
|
||||
main_dispatch,
|
||||
from_source,
|
||||
to_source,
|
||||
from_dest,
|
||||
to_dest,
|
||||
records,
|
||||
)
|
||||
};
|
||||
submit.set_onclick(Some(submit_callback.as_ref().unchecked_ref()));
|
||||
submit_callback.forget();
|
||||
|
||||
form.append_child(&from_source).unwrap();
|
||||
form.append_child(&to_source).unwrap();
|
||||
form.append_child(&from_dest).unwrap();
|
||||
form.append_child(&to_dest).unwrap();
|
||||
modal.append_child(&submit).unwrap();
|
||||
modal.append_child(&form).unwrap();
|
||||
}
|
||||
})
|
||||
}
|
||||
|
||||
pub fn import_transfer_csv_input_callback(
|
||||
main_dispatch: Dispatch<MainState>,
|
||||
modal: HtmlDialogElement,
|
||||
) -> Closure<dyn FnMut(Event)> {
|
||||
Closure::<dyn FnMut(_)>::new(move |e: Event| {
|
||||
if let Some(input) = e.current_target() {
|
||||
let input = input
|
||||
.dyn_into::<HtmlInputElement>()
|
||||
.expect("We know this is an input.");
|
||||
if let Some(files) = input.files() {
|
||||
if let Some(file) = files.get(0) {
|
||||
let fr = web_sys::FileReader::new().unwrap();
|
||||
fr.read_as_text(&file).unwrap();
|
||||
let fr1 = fr.clone(); // Clone to avoid outliving closure
|
||||
let main_dispatch = main_dispatch.clone(); // Clone to satisfy FnMut
|
||||
// trait
|
||||
let modal = modal.clone();
|
||||
let onload = import_transfer_csv_onload_callback(main_dispatch, fr1, modal);
|
||||
fr.set_onload(Some(onload.as_ref().unchecked_ref()));
|
||||
onload.forget(); // Magic (don't touch)
|
||||
}
|
||||
}
|
||||
}
|
||||
})
|
||||
}
|
||||
|
||||
pub fn import_transfer_csv_callback(main_dispatch: Dispatch<MainState>) -> Callback<MouseEvent> {
|
||||
Callback::from(move |_| {
|
||||
let window = web_sys::window().unwrap();
|
||||
let document = window.document().unwrap();
|
||||
let body = document.body().unwrap();
|
||||
let modal = document
|
||||
.create_element("dialog")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlDialogElement>()
|
||||
.unwrap();
|
||||
modal.set_text_content(Some("Import File:"));
|
||||
let onclose_callback = {
|
||||
let modal = modal.clone();
|
||||
Closure::<dyn FnMut(_)>::new(move |_: Event| {
|
||||
modal.remove();
|
||||
})
|
||||
};
|
||||
modal.set_onclose(Some(onclose_callback.as_ref().unchecked_ref()));
|
||||
|
||||
let close_button = create_close_button(&onclose_callback);
|
||||
onclose_callback.forget();
|
||||
modal.append_child(&close_button).unwrap();
|
||||
|
||||
let form = document
|
||||
.create_element("form")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlFormElement>()
|
||||
.unwrap();
|
||||
let input = document
|
||||
.create_element("input")
|
||||
.unwrap()
|
||||
.dyn_into::<HtmlInputElement>()
|
||||
.unwrap();
|
||||
input.set_type("file");
|
||||
input.set_accept(".csv");
|
||||
form.append_child(&input).unwrap();
|
||||
|
||||
let input_callback = {
|
||||
let main_dispatch = main_dispatch.clone();
|
||||
let modal = modal.clone();
|
||||
import_transfer_csv_input_callback(main_dispatch, modal)
|
||||
};
|
||||
input.set_onchange(Some(input_callback.as_ref().unchecked_ref()));
|
||||
input_callback.forget(); // Magic straight from the docs, don't touch :(
|
||||
|
||||
modal.append_child(&form).unwrap();
|
||||
body.append_child(&modal).unwrap();
|
||||
modal.show_modal().unwrap();
|
||||
})
|
||||
}
|
||||
|
||||
pub use super::import_csv_callbacks::import_transfer_csv_input_callback;
|
||||
|
|
|
|||
|
|
@ -2,4 +2,3 @@ pub mod main_window_callbacks;
|
|||
pub mod new_plate_dialog_callbacks;
|
||||
pub mod transfer_menu_callbacks;
|
||||
pub mod tree_callbacks;
|
||||
mod import_csv_callbacks;
|
||||
|
|
|
|||
|
|
@ -7,17 +7,17 @@ use std::error::Error;
|
|||
|
||||
#[derive(Serialize, Deserialize, Debug)]
|
||||
pub struct TransferRecord {
|
||||
#[serde(rename = "Source Plate", alias = "source plate", alias = "src plate")]
|
||||
#[serde(rename = "Source Plate")]
|
||||
pub source_plate: String,
|
||||
#[serde(rename = "Source Well", alias = "source well", alias = "src well")]
|
||||
#[serde(rename = "Source Well")]
|
||||
pub source_well: String,
|
||||
#[serde(rename = "Dest Plate", alias = "dest plate", alias = "destination plate")]
|
||||
#[serde(rename = "Dest Plate")]
|
||||
pub destination_plate: String,
|
||||
#[serde(rename = "Destination Well", alias = "destination well", alias = "dest well")]
|
||||
#[serde(rename = "Destination Well")]
|
||||
pub destination_well: String,
|
||||
#[serde(rename = "Transfer Volume", alias = "transfer volume")]
|
||||
#[serde(rename = "Transfer Volume")]
|
||||
pub volume: f32,
|
||||
#[serde(rename = "Concentration", alias = "concentration")]
|
||||
#[serde(rename = "Concentration")]
|
||||
pub concentration: Option<f32>,
|
||||
}
|
||||
|
||||
|
|
|
|||
Loading…
Reference in New Issue