pretty

Toggle values instead
Volume heatmap, checkboxes
2025-01-12 22:02:37 -05:00 · 2025-01-12 19:50:10 -05:00 · 2025-01-12 19:48:08 -05:00 · 2025-01-12 19:22:57 -05:00 · 2025-01-12 17:25:46 -05:00 · 2025-01-12 14:59:14 -05:00
22 changed files with 4914 additions and 53 deletions
--- a/Cargo.lock
+++ b/Cargo.lock
--- a/Cargo.toml
+++ b/Cargo.toml
@ -1,3 +1,3 @@
 [workspace]
-members = ["plate-tool-web", "plate-tool-lib"]
+members = ["plate-tool-web", "plate-tool-lib", "plate-tool-eframe"]
 resolver = "2"
--- a/0
+++ b/0
--- a/plate-tool-eframe/.cargo/config.toml
+++ b/plate-tool-eframe/.cargo/config.toml
@ -0,0 +1,2 @@
 [build]
 target = "x86_64-unknown-linux-gnu"
--- a/plate-tool-eframe/.gitignore
+++ b/plate-tool-eframe/.gitignore
@ -0,0 +1,2 @@
 /target
 /dist
--- a/plate-tool-eframe/Cargo.toml
+++ b/plate-tool-eframe/Cargo.toml
@ -0,0 +1,29 @@
 [package]
 name = "plate-tool-eframe"
 version = "0.1.0"
 edition = "2021"
 [dependencies]
 plate-tool-lib = { path = "../plate-tool-lib" }
 eframe = { version = "0.30", default-features = false, features = [
 	"default_fonts",
 	"glow",
 	"wayland",
 	"persistence",
 ]}
 log = "0.4"
 serde = { version = "1.0", features = ["derive"] }
 [target.'cfg(not(target_arch = "wasm32"))'.dependencies]
 env_logger = "0.11"
 [target.'cfg(target_arch = "wasm32")'.dependencies]
 wasm-bindgen-futures = "0.4"
 web-sys = "0.3"
 #[profile.release]
 #opt-level = 2
 #[profile.dev.package."*"]
 #opt-level = 2
--- a/plate-tool-eframe/Trunk.toml
+++ b/plate-tool-eframe/Trunk.toml
@ -0,0 +1,3 @@
 [build]
 target = "index.html"
 release = true
--- a/plate-tool-eframe/index.html
+++ b/plate-tool-eframe/index.html
@ -0,0 +1,53 @@
 <!DOCTYPE html>
 <html>
    <head>
        <meta charset="utf-8" />
        <link data-trunk rel="rust" data-bin="plate-tool-eframe" />
        <title>Plate Tool</title>
 <style>
 html {
            /* Remove touch delay: */
            touch-action: manipulation;
        }
        body {
            /* Light mode background color for what is not covered by the egui canvas,
            or where the egui canvas is translucent. */
            background: #909090;
        }
        @media (prefers-color-scheme: dark) {
            body {
                /* Dark mode background color for what is not covered by the egui canvas,
                or where the egui canvas is translucent. */
                background: #404040;
            }
        }
        /* Allow canvas to fill entire web page: */
        html,
        body {
            overflow: hidden;
            margin: 0 !important;
            padding: 0 !important;
            height: 100%;
            width: 100%;
        }
        /* Make canvas fill entire document: */
        canvas {
            margin-right: auto;
            margin-left: auto;
            display: block;
            position: absolute;
            top: 0;
            left: 0;
            width: 100%;
            height: 100%;
        }
 </style>
    </head>
    <body>
        <canvas id="main_canvas"></canvas>
    </body>
 </html>
--- a/plate-tool-eframe/src/app.rs
+++ b/plate-tool-eframe/src/app.rs
@ -0,0 +1,261 @@
 use std::ops::DerefMut;
 use std::sync::Mutex;
 use eframe::egui::{self};
 use crate::main_state::{construct_fake_mainstate, MainState};
 use crate::modals::{self, ModalState};
 use crate::plate::{add_plate, PlateDisplayOptions, PlateUiState};
 use crate::transfer_menu::{transfer_menu, CurrentTransferState, TransferMenuState};
 use crate::tree::tree;
 #[non_exhaustive]
 #[derive(Debug, serde::Serialize, serde::Deserialize)]
 struct MainWindowState {
    show_side_panel: bool,
    plate_display_options: PlateDisplayOptions,
 }
 impl Default for MainWindowState {
    fn default() -> Self {
        Self {
            show_side_panel: true,
            plate_display_options: PlateDisplayOptions::default(),
        }
    }
 }
 #[non_exhaustive]
 #[derive(Debug, serde::Serialize, serde::Deserialize)]
 pub struct PlateToolEframe {
    source_plate_state: Mutex<PlateUiState>,
    destination_plate_state: Mutex<PlateUiState>,
    main_window_state: MainWindowState,
    current_transfer_state: CurrentTransferState,
    #[serde(skip)]
    modal_state: ModalState,
    #[serde(skip)]
    transfer_menu_state: TransferMenuState,
    main_state: MainState,
 }
 impl Default for PlateToolEframe {
    fn default() -> Self {
        Self {
            source_plate_state: Mutex::new(PlateUiState::default()),
            destination_plate_state: Mutex::new(PlateUiState::default()),
            main_window_state: MainWindowState::default(),
            current_transfer_state: CurrentTransferState::default(),
            modal_state: ModalState::default(),
            transfer_menu_state: TransferMenuState::default(),
            main_state: construct_fake_mainstate(),
        }
    }
 }
 impl PlateToolEframe {
    pub fn new(cc: &eframe::CreationContext<'_>) -> Self {
        // Would load state here
        if let Some(storage) = cc.storage {
            let out: PlateToolEframe =
                eframe::get_value(storage, eframe::APP_KEY).unwrap_or_default();
            return out;
        } else {
            let pte: PlateToolEframe = Default::default();
            pte.main_state
                .transfer_region_cache
                .generate_cache(&pte.main_state.transfers);
            pte
        }
    }
 }
 impl eframe::App for PlateToolEframe {
    // State storage
    fn save(&mut self, storage: &mut dyn eframe::Storage) {
        log::info!("Saving state");
        eframe::set_value(storage, eframe::APP_KEY, self);
    }
    fn update(&mut self, ctx: &eframe::egui::Context, _frame: &mut eframe::Frame) {
        crate::styling::set_visuals(&ctx);
        egui::TopBottomPanel::top("top_panel").show(ctx, |ui| {
            egui::menu::bar(ui, |ui| {
                ui.menu_button("File", |ui| {
                    if ui.button("New Plate").clicked() {
                        crate::modals::open_new_plate_modal(&mut self.modal_state);
                    }
                    ui.menu_button("Export", |ui| {
                        if ui.button("Export as CSV").clicked() {}
                        if ui.button("Export as JSON").clicked() {}
                    });
                    ui.menu_button("Import", |ui| {
                        if ui.button("Import from JSON").clicked() {}
                        if ui.button("Import transfer from CSV").clicked() {}
                    });
                    if ui.button("Reset All").clicked() {
                        self.main_state = MainState::default();
                        self.current_transfer_state = CurrentTransferState::default();
                    }
                    if ui.button("Dump State").clicked() {
                        log::warn!("{:?}\n{:?}", self.main_state, self.current_transfer_state);
                    }
                });
                ui.menu_button("Options", |ui| {
                    ui.menu_button("Styles", |ui| {
                        ui.toggle_value(
                            &mut self
                                .main_window_state
                                .plate_display_options
                                .show_transfer_hashes,
                            "Toggle transfer hashes",
                        );
                        ui.toggle_value(
                            &mut self
                                .main_window_state
                                .plate_display_options
                                .show_volume_heatmap,
                            "Toggle volume heatmap",
                        );
                        ui.toggle_value(
                            &mut self
                                .main_window_state
                                .plate_display_options
                                .show_coordinates,
                            "Toggle coordinate highlighting",
                        );
                    });
                    ui.menu_button("Exports", |ui| {
                        if ui.button("Change CSV export type").clicked() {}
                    });
                    ui.menu_button("Windows", |ui| {
                        ui.toggle_value(
                            &mut self.main_window_state.show_side_panel,
                            "Toggle side panel",
                        );
                    });
                });
            });
        });
        if self.main_window_state.show_side_panel {
            egui::SidePanel::left("side_menus").show(ctx, |ui| {
                ui.vertical(|ui| {
                    tree(
                        ui,
                        &mut self.main_state,
                        &self.current_transfer_state,
                        &mut self.modal_state,
                    );
                    ui.separator();
                    transfer_menu(
                        ui,
                        &self.current_transfer_state,
                        &mut self.transfer_menu_state,
                        &mut self.main_state,
                    );
                });
            });
        }
        // This MUST happen after the menu calls as they can mutate main state
        let ordered_ids: Vec<plate_tool_lib::uuid::Uuid> = {
            let mut ids: Vec<plate_tool_lib::uuid::Uuid> = self
                .main_state
                .transfers
                .clone()
                .iter()
                .map(|x| x.id)
                .collect();
            ids.sort_unstable();
            ids
        };
        egui::CentralPanel::default().show(ctx, |ui| {
            ui.vertical(|ui| {
                let available_size = ui.available_size();
                let half_height = {
                    let mut x = available_size;
                    x.y /= 2.0;
                    x
                };
                if let Some(source_pi) = self.main_state.get_current_source_plateinstance() {
                    add_plate(
                        half_height,
                        source_pi.plate.plate_format,
                        self.main_state.get_current_source_transfers(),
                        plate_tool_lib::plate::PlateType::Source,
                        &ordered_ids,
                        &self.main_state.transfer_region_cache,
                        Some(&self.current_transfer_state),
                        ui,
                        self.source_plate_state.lock().unwrap().deref_mut(),
                        self.main_window_state.plate_display_options,
                    );
                }
                if let Some(destination_pi) =
                    self.main_state.get_current_destination_plateinstance()
                {
                    add_plate(
                        half_height,
                        destination_pi.plate.plate_format,
                        self.main_state.get_current_destination_transfers(),
                        plate_tool_lib::plate::PlateType::Destination,
                        &ordered_ids,
                        &self.main_state.transfer_region_cache,
                        Some(&self.current_transfer_state),
                        ui,
                        self.destination_plate_state.lock().unwrap().deref_mut(),
                        self.main_window_state.plate_display_options,
                    );
                }
            });
        });
        // Modal processing
        modals::show_modal_if_open(ctx, &mut self.modal_state);
        match &self.modal_state {
            modals::ModalState::NewPlateComplete(modals::NewPlateModalComplete(Some(pi))) => {
                let plate_type = pi.plate.plate_type;
                match plate_type {
                    plate_tool_lib::plate::PlateType::Source => {
                        self.main_state.source_plates.push(pi.clone());
                    }
                    plate_tool_lib::plate::PlateType::Destination => {
                        self.main_state.destination_plates.push(pi.clone());
                    }
                }
                self.modal_state = modals::ModalState::None;
            }
            modals::ModalState::EditPlateComplete(modals::EditPlateModalStateComplete(Some(x))) => {
                let pi = {
                    match x.plate_type {
                        plate_tool_lib::plate::PlateType::Source => self
                            .main_state
                            .source_plates
                            .iter_mut()
                            .find(|y| y.get_uuid() == x.id),
                        plate_tool_lib::plate::PlateType::Destination => self
                            .main_state
                            .destination_plates
                            .iter_mut()
                            .find(|y| y.get_uuid() == x.id),
                    }
                };
                if let Some(pi) = pi {
                    pi.name = x.name.to_owned();
                    pi.change_format(&x.plate_format);
                }
                self.modal_state = modals::ModalState::None;
            }
            ModalState::NewPlateComplete(modals::NewPlateModalComplete(None)) => {
                self.modal_state = modals::ModalState::None;
            }
            ModalState::EditPlateComplete(modals::EditPlateModalStateComplete(None)) => {
                self.modal_state = modals::ModalState::None;
            }
            _ => (),
        }
    }
 }
--- a/plate-tool-eframe/src/lib.rs
+++ b/plate-tool-eframe/src/lib.rs
@ -0,0 +1,8 @@
 mod app;
 mod plate;
 mod tree;
 mod transfer_menu;
 mod main_state;
 mod modals;
 mod styling;
 pub use app::PlateToolEframe;
--- a/plate-tool-eframe/src/main.rs
+++ b/plate-tool-eframe/src/main.rs
@ -0,0 +1,48 @@
 use eframe::egui;
 use eframe::*;
 #[cfg(not(target_arch = "wasm32"))]
 fn main() -> eframe::Result {
    env_logger::init();
    log::info!("Shrimp!");
    let native_options = eframe::NativeOptions {
        viewport: egui::ViewportBuilder::default().with_title("Shrimp"),
        ..Default::default()
    };
    eframe::run_native(
        "PlateToolEframe",
        native_options,
        Box::new(|cc| Ok(Box::new(plate_tool_eframe::PlateToolEframe::new(cc)))),
    )
 }
 #[cfg(target_arch = "wasm32")]
 fn main() {
    use eframe::wasm_bindgen::JsCast as _;
    eframe::WebLogger::init(log::LevelFilter::Info).ok();
    let web_options = eframe::WebOptions::default();
    wasm_bindgen_futures::spawn_local(async {
        let document = web_sys::window()
            .expect("No window")
            .document()
            .expect("No document");
        let canvas = document
            .get_element_by_id("main_canvas")
            .expect("Canvas id not found")
            .dyn_into::<web_sys::HtmlCanvasElement>()
            .expect("Canvas was not a HtmlCanvasElement");
        let start_result = eframe::WebRunner::new()
            .start(
                canvas,
                web_options,
                Box::new(|cc| Ok(Box::new(plate_tool_eframe::PlateToolEframe::new(cc)))),
            )
            .await;
    });
 }
--- a/plate-tool-eframe/src/main_state.rs
+++ b/plate-tool-eframe/src/main_state.rs
@ -0,0 +1,248 @@
 use core::fmt;
 use plate_tool_lib::plate::PlateFormat;
 use plate_tool_lib::plate_instances::{self, PlateInstance};
 use plate_tool_lib::transfer_region_cache::TransferRegionCache;
 #[derive(Default, serde::Serialize, serde::Deserialize)]
 pub struct MainState {
    /// Stores all plates and transfers
    ///
    /// It is not guaranteed that the current_* variables will refer
    /// to UUIDs that exist in the lists, only that they did at one time.
    /// This can happen if a plate or transfer is removed and set_* is not called.
    pub source_plates: Vec<plate_tool_lib::plate_instances::PlateInstance>,
    pub destination_plates: Vec<plate_tool_lib::plate_instances::PlateInstance>,
    pub transfers: Vec<plate_tool_lib::transfer::Transfer>,
    current_source: Option<plate_tool_lib::uuid::Uuid>,
    current_destination: Option<plate_tool_lib::uuid::Uuid>,
    current_transfer: Option<plate_tool_lib::uuid::Uuid>,
    #[serde(skip)]
    pub transfer_region_cache: plate_tool_lib::transfer_region_cache::TransferRegionCache,
 }
 impl MainState {
    pub fn get_current_source_uuid(&self) -> Option<plate_tool_lib::uuid::Uuid> {
        self.current_source
    }
    pub fn get_current_source_plateinstance(
        &self,
    ) -> Option<&plate_tool_lib::plate_instances::PlateInstance> {
        if let Some(id) = self.current_source {
            self.source_plates.iter().find(|x| x.get_uuid() == id)
        } else {
            None
        }
    }
    pub fn get_current_destination_uuid(&self) -> Option<plate_tool_lib::uuid::Uuid> {
        self.current_destination
    }
    pub fn get_current_destination_plateinstance(
        &self,
    ) -> Option<&plate_tool_lib::plate_instances::PlateInstance> {
        if let Some(id) = self.current_destination {
            self.destination_plates.iter().find(|x| x.get_uuid() == id)
        } else {
            None
        }
    }
    pub fn get_current_transfer_uuid(&self) -> Option<plate_tool_lib::uuid::Uuid> {
        self.current_transfer
    }
    pub fn get_current_transfer_info(&self) -> Option<&plate_tool_lib::transfer::Transfer> {
        if let Some(id) = self.current_transfer {
            self.transfers.iter().find(|x| x.get_uuid() == id)
        } else {
            None
        }
    }
    pub fn get_current_source_transfers(&self) -> Option<Vec<&plate_tool_lib::transfer::Transfer>> {
        let source_uuid = self.get_current_source_uuid();
        if let Some(source_uuid) = source_uuid {
            Some(
                self.transfers
                    .iter()
                    .filter(|tr| tr.source_id == source_uuid)
                    .collect(),
            )
        } else {
            None
        }
    }
    pub fn get_current_destination_transfers(&self) -> Option<Vec<&plate_tool_lib::transfer::Transfer>> {
        let destination_uuid = self.get_current_destination_uuid();
        if let Some(destination_uuid) = destination_uuid {
            Some(
                self.transfers
                    .iter()
                    .filter(|tr| tr.dest_id == destination_uuid)
                    .collect(),
            )
        } else {
            None
        }
    }
    pub fn set_current_source(&mut self, id: plate_tool_lib::uuid::Uuid) -> bool {
        if self.check_source_exists(id) {
            self.current_source = Some(id);
            self.set_no_current_transfer();
            true
        } else {
            false
        }
    }
    pub fn set_current_destination(&mut self, id: plate_tool_lib::uuid::Uuid) -> bool {
        if self.check_destination_exists(id) {
            self.current_destination = Some(id);
            self.set_no_current_transfer();
            true
        } else {
            false
        }
    }
    pub fn set_current_transfer(&mut self, id: plate_tool_lib::uuid::Uuid) -> bool {
        if let Some(tr) = self.transfers.iter().find(|x| x.get_uuid() == id) {
            let source_exists = self.check_source_exists(tr.source_id);
            let destination_exists = self.check_destination_exists(tr.dest_id);
            if source_exists && destination_exists {
                self.current_transfer = Some(id);
                self.current_source = Some(tr.source_id);
                self.current_destination = Some(tr.dest_id);
            }
            true
        } else {
            false
        }
    }
    pub fn set_no_current_source(&mut self) {
        self.current_source = None;
    }
    pub fn set_no_current_destination(&mut self) {
        self.current_destination = None;
    }
    pub fn set_no_current_transfer(&mut self) {
        self.current_transfer = None;
    }
    fn check_source_exists(&self, id: plate_tool_lib::uuid::Uuid) -> bool {
        self.source_plates
            .iter()
            .map(|x| x.get_uuid())
            .find(|x| *x == id)
            .is_some()
    }
    pub fn get_source_by_uuid(&self, id: plate_tool_lib::uuid::Uuid) -> Option<&PlateInstance> {
        self.source_plates
            .iter()
            .find(|x| x.get_uuid() == id)
    }
    fn check_destination_exists(&self, id: plate_tool_lib::uuid::Uuid) -> bool {
        self.destination_plates
            .iter()
            .map(|x| x.get_uuid())
            .find(|x| *x == id)
            .is_some()
    }
    pub fn get_destination_by_uuid(&self, id: plate_tool_lib::uuid::Uuid) -> Option<&PlateInstance> {
        self.destination_plates
            .iter()
            .find(|x| x.get_uuid() == id)
    }
 }
 impl fmt::Debug for MainState {
    fn fmt(&self, f: &mut fmt::Formatter<'_>) -> Result<(), fmt::Error> {
        #[derive(Debug)]
        #[allow(dead_code)]
        struct SelectedFields<'a> {
            pub source_plates: &'a Vec<plate_tool_lib::plate_instances::PlateInstance>,
            pub destination_plates: &'a Vec<plate_tool_lib::plate_instances::PlateInstance>,
            pub transfers: &'a Vec<plate_tool_lib::transfer::Transfer>,
            current_source: &'a Option<plate_tool_lib::uuid::Uuid>,
            current_destination: &'a Option<plate_tool_lib::uuid::Uuid>,
            current_transfer: &'a Option<plate_tool_lib::uuid::Uuid>,
        }
        let Self {
            source_plates,
            destination_plates,
            transfers,
            current_source,
            current_destination,
            current_transfer,
            transfer_region_cache: _,
        } = self;
        fmt::Debug::fmt(
            &SelectedFields {
                source_plates,
                destination_plates,
                transfers,
                current_source,
                current_destination,
                current_transfer,
            },
            f,
        )
    }
 }
 pub fn construct_fake_mainstate() -> MainState {
    let src_plate: plate_tool_lib::plate_instances::PlateInstance =
        plate_instances::PlateInstance::new(
            plate_tool_lib::plate::PlateType::Source,
            PlateFormat::W96,
            "src1".to_owned(),
        );
    let dest_plate: plate_tool_lib::plate_instances::PlateInstance =
        plate_instances::PlateInstance::new(
            plate_tool_lib::plate::PlateType::Destination,
            PlateFormat::W96,
            "dest1".to_owned(),
        );
    let well_a1 = plate_tool_lib::Well { row: 1, col: 1 };
    let well_c3 = plate_tool_lib::Well { row: 3, col: 3 };
    let well_a5 = plate_tool_lib::Well { row: 1, col: 5 };
    let transfer1_region: plate_tool_lib::transfer_region::TransferRegion =
        plate_tool_lib::transfer_region::TransferRegion {
            source_plate: src_plate.plate,
            source_region: plate_tool_lib::transfer_region::Region::Rect(well_a1, well_c3),
            dest_plate: dest_plate.plate,
            dest_region: plate_tool_lib::transfer_region::Region::Point(well_a1),
            interleave_source: (1, 1),
            interleave_dest: (1, 1),
        };
    let transfer1: plate_tool_lib::transfer::Transfer = plate_tool_lib::transfer::Transfer::new(
        src_plate.clone(),
        dest_plate.clone(),
        transfer1_region,
        "Shrimp".to_owned(),
    );
    let transfer2_region: plate_tool_lib::transfer_region::TransferRegion =
        plate_tool_lib::transfer_region::TransferRegion {
            source_plate: src_plate.plate,
            source_region: plate_tool_lib::transfer_region::Region::Rect(well_a1, well_c3),
            dest_plate: dest_plate.plate,
            dest_region: plate_tool_lib::transfer_region::Region::Point(well_a5),
            interleave_source: (1, 1),
            interleave_dest: (2, 2),
        };
    let transfer2: plate_tool_lib::transfer::Transfer = plate_tool_lib::transfer::Transfer::new(
        src_plate.clone(),
        dest_plate.clone(),
        transfer2_region,
        "Shrimp".to_owned(),
    );
    MainState {
        source_plates: vec![src_plate],
        destination_plates: vec![dest_plate],
        transfers: vec![transfer1, transfer2],
        current_source: None,
        current_destination: None,
        current_transfer: None,
        transfer_region_cache: TransferRegionCache::default(),
    }
 }
--- a/plate-tool-eframe/src/modals.rs
+++ b/plate-tool-eframe/src/modals.rs
@ -0,0 +1,235 @@
 use eframe::egui;
 #[non_exhaustive]
 #[derive(Debug)]
 pub enum ModalState {
    NewPlate(NewPlateModalState),
    NewPlateComplete(NewPlateModalComplete),
    EditPlate(EditPlateModalState),
    EditPlateComplete(EditPlateModalStateComplete),
    None,
 }
 impl Default for ModalState {
    fn default() -> Self {
        Self::None
    }
 }
 #[non_exhaustive]
 #[derive(Debug)]
 pub struct NewPlateModalState {
    pub name: String,
    pub plate_type: plate_tool_lib::plate::PlateType,
    pub plate_format: plate_tool_lib::plate::PlateFormat,
    window_open: bool,
 }
 impl Default for NewPlateModalState {
    fn default() -> Self {
        Self {
            name: String::default(),
            plate_type: plate_tool_lib::plate::PlateType::default(),
            plate_format: plate_tool_lib::plate::PlateFormat::default(),
            window_open: true,
        }
    }
 }
 #[non_exhaustive]
 #[derive(Debug, Default)]
 pub struct NewPlateModalComplete(pub Option<plate_tool_lib::plate_instances::PlateInstance>);
 pub fn show_modal_if_open(ctx: &egui::Context, modal_state: &mut ModalState) {
    match modal_state {
        ModalState::NewPlate(_) => show_new_plate_modal(ctx, modal_state),
        ModalState::EditPlate(_) => show_edit_plate_modal(ctx, modal_state),
        _ => (),
    }
 }
 fn show_new_plate_modal(ctx: &egui::Context, modal_state: &mut ModalState) {
    let state: &mut NewPlateModalState = {
        if let ModalState::NewPlate(x) = modal_state {
            x
        } else {
            *modal_state = ModalState::NewPlate(NewPlateModalState::default());
            if let ModalState::NewPlate(y) = modal_state {
                y
            } else {
                unreachable!()
            }
        }
    };
    let mut output: Option<plate_tool_lib::plate_instances::PlateInstance> = None;
    egui::Window::new("New Plate")
        .order(egui::Order::Foreground)
        .collapsible(false)
        .resizable(false)
        .open(&mut state.window_open)
        .show(ctx, |ui| {
            ui.vertical(|ui| {
                ui.add(egui::TextEdit::singleline(&mut state.name).hint_text("Plate Name"));
                egui::ComboBox::from_label("Plate Type")
                    .selected_text(format!("{:?}", state.plate_type))
                    .show_ui(ui, |ui| {
                        ui.selectable_value(
                            &mut state.plate_type,
                            plate_tool_lib::plate::PlateType::Source,
                            "Source",
                        );
                        ui.selectable_value(
                            &mut state.plate_type,
                            plate_tool_lib::plate::PlateType::Destination,
                            "Destination",
                        );
                    });
                egui::ComboBox::from_label("Plate Format")
                    .selected_text(format!("{:?}", state.plate_format))
                    .show_ui(ui, |ui| {
                        ui.selectable_value(
                            &mut state.plate_format,
                            plate_tool_lib::plate::PlateFormat::W96,
                            "96W",
                        );
                        ui.selectable_value(
                            &mut state.plate_format,
                            plate_tool_lib::plate::PlateFormat::W384,
                            "384W",
                        );
                        ui.selectable_value(
                            &mut state.plate_format,
                            plate_tool_lib::plate::PlateFormat::W1536,
                            "1536W",
                        );
                    });
                if ui.button("Add").clicked() {
                    output = Some(plate_tool_lib::plate_instances::PlateInstance::new(
                        state.plate_type,
                        state.plate_format,
                        state.name.clone(),
                    ));
                }
            });
        });
    if state.window_open == false {
        *modal_state = ModalState::NewPlateComplete(NewPlateModalComplete(None));
        return;
    }
    if output.is_some() {
        *modal_state = ModalState::NewPlateComplete(NewPlateModalComplete(output));
    }
 }
 pub fn open_new_plate_modal(modal_state: &mut ModalState) {
    // Do not close another modal
    if matches!(modal_state, ModalState::None) {
        *modal_state = ModalState::NewPlate(NewPlateModalState::default());
    }
 }
 #[non_exhaustive]
 #[derive(Debug, Clone)]
 pub struct EditPlateModalState {
    pub name: String,
    pub plate_type: plate_tool_lib::plate::PlateType,
    pub plate_format: plate_tool_lib::plate::PlateFormat,
    pub id: plate_tool_lib::uuid::Uuid,
    window_open: bool,
 }
 impl EditPlateModalState {
    fn new(
        name: &str,
        plate_type: plate_tool_lib::plate::PlateType,
        plate_format: plate_tool_lib::plate::PlateFormat,
        id: plate_tool_lib::uuid::Uuid,
    ) -> Self {
        Self {
            name: name.to_owned(),
            plate_type,
            plate_format,
            id,
            window_open: true,
        }
    }
 }
 #[non_exhaustive]
 #[derive(Debug)]
 pub struct EditPlateModalStateComplete(pub Option<EditPlateModalState>);
 fn show_edit_plate_modal(ctx: &egui::Context, modal_state: &mut ModalState) {
    let state: &mut EditPlateModalState = {
        if let ModalState::EditPlate(x) = modal_state {
            x
        } else {
            return;
        }
    };
    let mut should_complete: bool = false;
    egui::Window::new("Edit Plate")
        .order(egui::Order::Foreground)
        .collapsible(false)
        .resizable(false)
        .open(&mut state.window_open)
        .show(ctx, |ui| {
            ui.vertical(|ui| {
                ui.add(egui::TextEdit::singleline(&mut state.name).hint_text("Plate Name"));
                egui::ComboBox::from_label("Plate Format")
                    .selected_text(format!("{:?}", state.plate_format))
                    .show_ui(ui, |ui| {
                        ui.selectable_value(
                            &mut state.plate_format,
                            plate_tool_lib::plate::PlateFormat::W96,
                            "96W",
                        );
                        ui.selectable_value(
                            &mut state.plate_format,
                            plate_tool_lib::plate::PlateFormat::W384,
                            "384W",
                        );
                        ui.selectable_value(
                            &mut state.plate_format,
                            plate_tool_lib::plate::PlateFormat::W1536,
                            "1536W",
                        );
                    });
                if ui.button("Save").clicked() {
                    should_complete = true;
                }
            });
        });
    if state.window_open == false {
        *modal_state = ModalState::EditPlateComplete(EditPlateModalStateComplete(None));
        return;
    }
    if should_complete {
        *modal_state =
            ModalState::EditPlateComplete(EditPlateModalStateComplete(Some(state.to_owned())));
        return;
    }
 }
 pub fn open_edit_plate_modal(
    modal_state: &mut ModalState,
    name: &str,
    plate_type: plate_tool_lib::plate::PlateType,
    plate_format: plate_tool_lib::plate::PlateFormat,
    id: plate_tool_lib::uuid::Uuid,
 ) {
    // Do not close another modal
    if matches!(modal_state, ModalState::None) {
        *modal_state =
            ModalState::EditPlate(EditPlateModalState::new(name, plate_type, plate_format, id))
    }
 }
 pub fn open_edit_plate_modal_plateinstance(
    modal_state: &mut ModalState,
    plate_instance: &plate_tool_lib::plate_instances::PlateInstance,
 ) {
    // Do not close another modal
    if matches!(modal_state, ModalState::None) {
        *modal_state = ModalState::EditPlate(EditPlateModalState::new(
            &plate_instance.name,
            plate_instance.plate.plate_type,
            plate_instance.plate.plate_format,
            plate_instance.get_uuid(),
        ));
    }
 }
--- a/plate-tool-eframe/src/plate.rs
+++ b/plate-tool-eframe/src/plate.rs
@ -0,0 +1,515 @@
 use eframe::egui::{self, pos2, Color32, Rounding};
 use eframe::glow::OFFSET;
 use plate_tool_lib::plate::PlateFormat;
 use plate_tool_lib::transfer_region::Region;
 use plate_tool_lib::uuid::Uuid;
 use plate_tool_lib::Well;
 use crate::transfer_menu::CurrentTransferState;
 use std::sync::LazyLock;
 const PALETTE: plate_tool_lib::util::ColorPalette = plate_tool_lib::util::Palettes::RAINBOW;
 // Stroke types
 static STROKE_DEFAULT: LazyLock<egui::Stroke> =
    LazyLock::new(|| egui::Stroke::new(2.0, egui::Color32::from_gray(80)));
 static STROKE_CURRENT: LazyLock<egui::Stroke> =
    LazyLock::new(|| egui::Stroke::new(2.0, egui::Color32::from_gray(30)));
 static STROKE_SELECT: LazyLock<egui::Stroke> =
    LazyLock::new(|| egui::Stroke::new(3.0, egui::Color32::from_gray(30)));
 static STROKE_HOVER: LazyLock<egui::Stroke> =
    LazyLock::new(|| egui::Stroke::new(3.0, egui::Color32::from_gray(0)));
 #[derive(Clone, Debug, serde::Serialize, serde::Deserialize)]
 pub struct PlateUiState {
    pub drag_start_position: Option<egui::Pos2>,
 }
 impl Default for PlateUiState {
    fn default() -> Self {
        Self {
            drag_start_position: None,
        }
    }
 }
 #[derive(Clone, Copy, Debug)]
 struct WellInfo {
    volume: f32,
    color: [f64; 3],
    highlight: bool,
    fill: bool,
 }
 impl WellInfo {
    fn new(volume: f32, color: [f64; 3]) -> Self {
        WellInfo {
            volume,
            color,
            highlight: false,
            fill: true,
        }
    }
 }
 #[derive(Clone, Copy, Debug, serde::Serialize, serde::Deserialize)]
 pub struct PlateDisplayOptions {
    pub show_transfer_hashes: bool,
    pub show_volume_heatmap: bool,
    pub show_coordinates: bool,
 }
 impl Default for PlateDisplayOptions {
    fn default() -> Self {
        Self {
            show_transfer_hashes: true,
            show_volume_heatmap: false,
            show_coordinates: true,
        }
    }
 }
 fn calculate_grid_params(
    ul_origin: (f32, f32),
    tw: f32,
    th: f32,
    rows: u8,
    columns: u8,
 ) -> (f32, f32, f32) {
    // (Start X, Start Y, Radius)
    const PADDING: f32 = 20.0;
    let usable_width = tw - 2.0 * PADDING;
    let usable_height = th - 2.0 * PADDING;
    let shared_width = f32::ceil(usable_width / columns as f32);
    let shared_height = f32::ceil(usable_height / rows as f32);
    let radius = f32::min(shared_width, shared_height) / 2.0;
    (ul_origin.0 + PADDING, ul_origin.1 + PADDING, radius)
 }
 fn get_hover_well(
    response: &egui::Response,
    start_x: f32,
    start_y: f32,
    radius: f32,
    rows: u8,
    columns: u8,
 ) -> Option<(u8, u8)> {
    get_well_from_pos(
        response.hover_pos(),
        start_x,
        start_y,
        radius,
        rows,
        columns,
        true,
    )
 }
 fn get_well_from_pos(
    position: Option<egui::Pos2>,
    start_x: f32,
    start_y: f32,
    radius: f32,
    rows: u8,
    columns: u8,
    saturate: bool,
 ) -> Option<(u8, u8)> {
    // cool fact: the bounds of our frame aren't actually the bounds of what counts
    // as hovering. as a result, we have to make sure that we check these bounds here.
    // yippee
    let max_width = start_x + radius * 2.0 * columns as f32;
    let max_height = start_y + radius * 2.0 * rows as f32;
    // Some((row, column))
    position
        .map(|p| Into::<(f32, f32)>::into(p))
        .and_then(|(x, y)| {
            // Check bounds if no saturation
            if !saturate && (x < start_x || y < start_y || x > max_width || y > max_height) {
                return None;
            }
            let solved_column: u8 = match x {
                x if (x < start_x) => 1,
                x if (x > max_width) => columns,
                _ => (x - start_x).div_euclid(radius * 2.0) as u8 + 1u8,
            };
            let solved_row: u8 = match y {
                y if (y < start_y) => 1,
                y if (y > max_height) => rows,
                _ => (y - start_y).div_euclid(radius * 2.0) as u8 + 1u8,
            };
            Some((solved_row, solved_column))
        })
 }
 fn calculate_shading_for_wells(
    rows: u8,
    columns: u8,
    transfers: Option<Vec<&plate_tool_lib::transfer::Transfer>>,
    plate_type: plate_tool_lib::plate::PlateType,
    ordered_ids: &[Uuid],
    cache: &plate_tool_lib::transfer_region_cache::TransferRegionCache,
    display_options: PlateDisplayOptions,
 ) -> Box<[Option<WellInfo>]> {
    let box_size: usize = rows as usize * columns as usize;
    let mut well_infos: Box<[Option<WellInfo>]> = vec![None; box_size].into_boxed_slice();
    if let Some(transfers) = transfers {
        // Needed for palette
        let max_volume: f32 = transfers
            .iter()
            .flat_map(|v| match v.volume {
                plate_tool_lib::transfer_volume::TransferVolume::Single(x) => Some(x),
                _ => None,
            })
            .fold(f32::MIN, f32::max)
            .max(1.0f32); // Otherwise f32::MIN is return value
        for transfer in transfers {
            let cache_result = match plate_type {
                plate_tool_lib::plate::PlateType::Source => cache.get_or_calculate_source(transfer),
                plate_tool_lib::plate::PlateType::Destination => {
                    cache.get_or_calculate_destination(transfer)
                }
            };
            let volume = if let plate_tool_lib::transfer_volume::TransferVolume::Single(x) =
                transfer.volume
            {
                x
            } else {
                0.0
            };
            if let Some(wells) = cache_result {
                for well in wells.iter().filter(|x| x.row <= rows && x.col <= columns) {
                    if let Some(Some(mut x)) = well_infos.get_mut(
                        (well.row - 1) as usize * columns as usize + (well.col - 1) as usize,
                    ) {
                        x.volume += volume;
                        x.color = if display_options.show_volume_heatmap {
                            PALETTE.get_linear(volume.into(), max_volume.into())
                        } else {
                            PALETTE.get_ordered(transfer.id, ordered_ids)
                        };
                    } else {
                        if let Some(mut wi) = well_infos.get_mut(
                            (well.row - 1) as usize * columns as usize + (well.col - 1) as usize,
                        ) {
                            *wi = Some(WellInfo::new(
                                volume,
                                if display_options.show_volume_heatmap {
                                    PALETTE.get_linear(volume.into(), max_volume.into())
                                } else {
                                    PALETTE.get_ordered(transfer.id, ordered_ids)
                                },
                            ));
                        }
                    }
                }
            }
        }
    }
    well_infos
 }
 fn f64_to_color32(x: [f64; 3]) -> Color32 {
    let r = x[0] as u8;
    let g = x[1] as u8;
    let b = x[2] as u8;
    Color32::from_rgb(r, g, b)
 }
 fn draw_cross(painter: &egui::Painter, center: egui::Pos2, radius: f32, stroke: egui::Stroke) {
    // Generate points on circle
    const OFFSET_ARRAY_X: [f32; 4] = [0.71, -0.71, -0.71, 0.71]; // == sin(2pi/8) == cos(2pi/8)
    const OFFSET_ARRAY_Y: [f32; 4] = [0.71, 0.71, -0.71, -0.71];
    let radius_adjusted_array_x: [f32; 4] = core::array::from_fn(|x| OFFSET_ARRAY_X[x] * radius);
    let radius_adjusted_array_y: [f32; 4] = core::array::from_fn(|y| OFFSET_ARRAY_Y[y] * radius);
    let xs: [f32; 4] = core::array::from_fn(|x| radius_adjusted_array_x[x] + center.x);
    let ys: [f32; 4] = core::array::from_fn(|y| radius_adjusted_array_y[y] + center.y);
    let pts: [egui::Pos2; 4] = core::array::from_fn(|i| egui::Pos2::new(xs[i], ys[i]));
    painter.line_segment([pts[0], pts[2]], stroke);
    painter.line_segment([pts[1], pts[3]], stroke);
 }
 fn add_plate_sub(
    size: egui::Vec2,
    rows: u8,
    columns: u8,
    transfers: Option<Vec<&plate_tool_lib::transfer::Transfer>>,
    plate_type: plate_tool_lib::plate::PlateType,
    ordered_ids: &[Uuid],
    cache: &plate_tool_lib::transfer_region_cache::TransferRegionCache,
    current_transfer_state: Option<&CurrentTransferState>,
    ui: &mut egui::Ui,
    state: &mut PlateUiState,
    display_options: PlateDisplayOptions,
 ) {
    let (response, painter) = ui.allocate_painter(size, egui::Sense::click_and_drag());
    let rect = response.rect;
    let ul_origin = rect.left_top();
    let total_width = rect.width();
    let total_height = rect.height();
    let (start_x, start_y, radius) =
        calculate_grid_params(ul_origin.into(), total_width, total_height, rows, columns);
    // Manage clicks and drags
    if response.drag_started() {
        state.drag_start_position = Some(response.hover_pos().unwrap());
    }
    let drag_start_well = get_well_from_pos(
        state.drag_start_position,
        start_x,
        start_y,
        radius,
        rows,
        columns,
        false,
    );
    let hovered_well = get_hover_well(&response, start_x, start_y, radius, rows, columns);
    if response.clicked() {
        if let Some(cts) = current_transfer_state {
            let end_well: Option<Well> = hovered_well.map(|(row, col)| Well { row, col });
            if let Some(end_well) = end_well {
                let new_region = Region::new_from_wells(end_well, None);
                let mut cts = cts.lock().unwrap();
                match plate_type {
                    plate_tool_lib::plate::PlateType::Source => cts.source_region = new_region,
                    plate_tool_lib::plate::PlateType::Destination => {
                        cts.destination_region = new_region
                    }
                }
            }
        }
    }
    if response.drag_stopped() {
        if let Some(cts) = current_transfer_state {
            if let Some(start_well) = drag_start_well.map(|(row, col)| Well { row, col }) {
                let end_well: Option<Well> = hovered_well.map(|(row, col)| Well { row, col });
                let new_region = Region::new_from_wells(start_well, end_well);
                let mut cts = cts.lock().unwrap();
                match plate_type {
                    plate_tool_lib::plate::PlateType::Source => cts.source_region = new_region,
                    plate_tool_lib::plate::PlateType::Destination => {
                        cts.destination_region = new_region
                    }
                }
            }
        }
        state.drag_start_position = None;
    }
    let current_selection: Option<Region> = {
        if let Some(cts) = current_transfer_state {
            let cts = cts.lock().unwrap();
            match plate_type {
                plate_tool_lib::plate::PlateType::Source => Some(cts.source_region.clone()),
                plate_tool_lib::plate::PlateType::Destination => {
                    Some(cts.destination_region.clone())
                }
            }
        } else {
            None
        }
    };
    let well_infos = {
        // Get non-active transfer info
        let mut well_infos =
            calculate_shading_for_wells(rows, columns, transfers, plate_type, ordered_ids, cache, display_options);
        // Get wells in the current transfer to tack on to well_infos separately
        let current_transfer_wells: Option<Box<[(usize, usize)]>> = {
            (match plate_type {
                plate_tool_lib::plate::PlateType::Source => current_transfer_state
                    .and_then(|x| x.lock().ok())
                    .map(|mut x| x.get_source_wells()),
                plate_tool_lib::plate::PlateType::Destination => current_transfer_state
                    .and_then(|x| x.lock().ok())
                    .map(|mut x| x.get_destination_wells()),
            })
            .map(|xs| {
                xs.iter()
                    .map(|x| (x.row as usize, x.col as usize))
                    .collect()
            })
        };
        if let Some(wells) = current_transfer_wells {
            for w in wells {
                if let Some(mut well_info) =
                    well_infos.get_mut((w.0 - 1) * columns as usize + (w.1 - 1))
                {
                    let volume = well_info.map(|x| x.volume).unwrap_or(0.0)
                        + current_transfer_state
                            .and_then(|x| x.lock().ok())
                            .map(|x| x.volume)
                            .unwrap_or(0.0);
                    let color = well_info.map(|x| x.color).unwrap_or([255.0, 255.0, 255.0]);
                    let fill = well_info.map(|x| x.color).is_some();
                    *well_info = Some(WellInfo {
                        color,
                        volume: 1.0,
                        fill,
                        highlight: true,
                    })
                }
            }
        }
        well_infos
    };
    // Plate Frame
    painter.rect_stroke(
        egui::Rect {
            min: pos2(start_x, start_y),
            max: pos2(
                start_x + 2.0 * radius * columns as f32,
                start_y + 2.0 * radius * rows as f32,
            ),
        },
        Rounding::default(),
        *STROKE_DEFAULT,
    );
    // Draw wells
    for c_row in 1..=rows {
        for c_column in 1..=columns {
            let center = egui::pos2(
                start_x + radius + 2.0 * radius * (c_column - 1) as f32,
                start_y + radius + 2.0 * radius * (c_row - 1) as f32,
            );
            //
            // Draw fill first
            //
            if let Some(well_info) =
                well_infos[(c_row - 1) as usize * columns as usize + (c_column - 1) as usize]
            {
                if well_info.fill {
                    painter.circle_filled(center, radius * 0.80, f64_to_color32(well_info.color));
                }
                if well_info.highlight && display_options.show_transfer_hashes {
                    draw_cross(&painter, center, radius * 0.80, *STROKE_CURRENT);
                }
            }
            //
            // Draw stroke on top
            //
            // Base stroke
            painter.circle_stroke(center, radius * 0.80, *STROKE_DEFAULT);
            if current_selection.as_ref().is_some_and(|x| {
                x.contains_well(
                    &Well {
                        row: c_row,
                        col: c_column,
                    },
                    None,
                )
            }) {
                painter.circle_stroke(center, radius * 0.80, *STROKE_CURRENT);
            }
            if response.dragged() {
                if let (Some(hw), Some(dw)) = (hovered_well, drag_start_well) {
                    if c_column <= u8::max(hw.1, dw.1)
                        && c_column >= u8::min(hw.1, dw.1)
                        && c_row <= u8::max(hw.0, dw.0)
                        && c_row >= u8::min(hw.0, dw.0)
                    {
                        painter.circle_stroke(center, radius * 0.80, *STROKE_SELECT);
                    }
                }
            }
            if Some((c_row, c_column)) == hovered_well {
                painter.circle_stroke(center, radius * 0.80, *STROKE_HOVER);
            }
        }
    }
    // Draw row/column labels
    let default_font = egui::FontId::monospace(f32::min(radius, 14.0));
    static DEFAULT_TEXT_COLOR: LazyLock<egui::Color32> =
        LazyLock::new(|| egui::Color32::from_gray(128));
    static HIGHLIGHT_TEXT_COLOR: LazyLock<egui::Color32> =
        LazyLock::new(|| egui::Color32::from_gray(0));
    for c_row in 0..rows {
        let text_color = {
            if display_options.show_coordinates && hovered_well.is_some_and(|x| x.0 == c_row + 1) {
                *HIGHLIGHT_TEXT_COLOR
            } else {
                *DEFAULT_TEXT_COLOR
            }
        };
        painter.text(
            egui::pos2(
                start_x - 10.0,
                start_y + radius + 2.0 * radius * c_row as f32,
            ),
            egui::Align2::CENTER_CENTER,
            (c_row + 1).to_string(),
            default_font.clone(),
            text_color,
        );
    }
    for c_column in 0..columns {
        let text_color = {
            if display_options.show_coordinates && hovered_well.is_some_and(|x| x.1 == c_column + 1)
            {
                *HIGHLIGHT_TEXT_COLOR
            } else {
                *DEFAULT_TEXT_COLOR
            }
        };
        painter.text(
            egui::pos2(
                start_x + radius + 2.0 * radius * c_column as f32,
                start_y - 12.0,
            ),
            egui::Align2::CENTER_CENTER,
            plate_tool_lib::util::num_to_letters(c_column + 1).unwrap(),
            default_font.clone(),
            text_color,
        );
    }
 }
 pub fn add_plate(
    size: egui::Vec2,
    pf: PlateFormat,
    transfers: Option<Vec<&plate_tool_lib::transfer::Transfer>>,
    plate_type: plate_tool_lib::plate::PlateType,
    ordered_ids: &[Uuid],
    cache: &plate_tool_lib::transfer_region_cache::TransferRegionCache,
    current_transfer_state: Option<&CurrentTransferState>,
    ui: &mut egui::Ui,
    state: &mut PlateUiState,
    display_options: PlateDisplayOptions,
 ) {
    add_plate_sub(
        size,
        pf.rows(),
        pf.columns(),
        transfers,
        plate_type,
        ordered_ids,
        cache,
        current_transfer_state,
        ui,
        state,
        display_options,
    );
 }
--- a/plate-tool-eframe/src/styling.rs
+++ b/plate-tool-eframe/src/styling.rs
@ -0,0 +1,135 @@
 use std::sync::LazyLock;
 use eframe::egui::{
    self,
    style::{Selection, Visuals, WidgetVisuals, Widgets},
    Color32, Stroke,
 };
 pub fn set_visuals(ctx: &egui::Context) {
    let current = ctx.style().visuals.clone();
    let visuals = Visuals {
        override_text_color: Some(STANDARD_THEME.text),
        faint_bg_color: STANDARD_THEME.surface0,
        extreme_bg_color: STANDARD_THEME.surface0,
        window_fill: STANDARD_THEME.base,
        panel_fill: STANDARD_THEME.base,
        window_stroke: Stroke {
            color: STANDARD_THEME.overlay1,
            ..current.window_stroke
        },
        widgets: Widgets {
            noninteractive: make_widget_visual(
                current.widgets.noninteractive,
                STANDARD_THEME.base,
                &STANDARD_THEME,
            ),
            inactive: make_widget_visual(
                current.widgets.inactive,
                STANDARD_THEME.surface0,
                &STANDARD_THEME,
            ),
            hovered: make_widget_visual(
                current.widgets.hovered,
                STANDARD_THEME.light_purple,
                &STANDARD_THEME,
            ),
            active: make_widget_visual(
                current.widgets.active,
                STANDARD_THEME.surface1,
                &STANDARD_THEME,
            ),
            open: make_widget_visual(
                current.widgets.open,
                STANDARD_THEME.surface0,
                &STANDARD_THEME,
            ),
        },
        selection: Selection {
            bg_fill: STANDARD_THEME.purple,
            stroke: Stroke {
                color: STANDARD_THEME.overlay1,
                ..current.selection.stroke
            },
        },
        ..current
    };
    ctx.set_visuals(visuals);
 }
 fn make_widget_visual(current: WidgetVisuals, bg: Color32, theme: &Theme) -> WidgetVisuals {
    WidgetVisuals {
        bg_fill: bg,
        weak_bg_fill: bg,
        bg_stroke: Stroke {
            color: theme.overlay1,
            ..current.bg_stroke
        },
        fg_stroke: Stroke {
            color: theme.text,
            ..current.fg_stroke
        },
        ..current
    }
 }
 pub static STANDARD_THEME: LazyLock<Theme> = LazyLock::new(|| {
    Theme::standard()
 });
 #[derive(Debug)]
 pub struct Theme {
    pub base: Color32,
    pub surface0: Color32,
    pub surface1: Color32,
    pub surface2: Color32,
    pub overlay0: Color32,
    pub overlay1: Color32,
    pub overlay2: Color32,
    pub text: Color32,
    pub purple: Color32,
    pub light_purple: Color32,
 }
 impl Theme {
    fn standard() -> Self {
        const BASE_HUE: f32 = 45.0;
        const BASE_SATURATION: f32 = 40.0;
        Self {
            base: hsl_to_color32(BASE_HUE, BASE_SATURATION, 88.0),
            surface0: hsl_to_color32(BASE_HUE, BASE_SATURATION, 80.0),
            surface1: hsl_to_color32(BASE_HUE, BASE_SATURATION, 75.0),
            surface2: hsl_to_color32(BASE_HUE, BASE_SATURATION, 65.0),
            overlay0: hsl_to_color32(BASE_HUE, BASE_SATURATION, 60.0),
            overlay1: hsl_to_color32(BASE_HUE, BASE_SATURATION, 55.0),
            overlay2: hsl_to_color32(BASE_HUE, BASE_SATURATION, 50.0),
            text: hsl_to_color32(BASE_HUE, BASE_SATURATION, 25.0),
            purple: hsl_to_color32(270.0, 80.0, 80.0),
            light_purple: hsl_to_color32(270.0, 70.0, 90.0),
        }
    }
 }
 fn hsl_to_rgb(h: f32, s: f32, l: f32) -> (u8, u8, u8) {
    let s = s / 100.0;
    let l = l / 100.0;
    let chroma = (1.0 - f32::abs(2.0 * l - 1.0)) * s;
    let h_prime = h / 60.0;
    let x = chroma * (1.0 - f32::abs((h_prime % 2.0) - 1.0));
    let (r1, g1, b1) = match h_prime {
        _ if h_prime < 1.0 => (chroma, x, 0.0),
        _ if h_prime >= 1.0 && h_prime < 2.0 => (x, chroma, 0.0),
        _ if h_prime >= 2.0 && h_prime < 3.0 => (0.0, chroma, x),
        _ if h_prime >= 3.0 && h_prime < 4.0 => (0.0, x, chroma),
        _ if h_prime >= 4.0 && h_prime < 5.0 => (x, 0.0, chroma),
        _ if h_prime >= 5.0 && h_prime < 6.0 => (chroma, 0.0, x),
        _ => unreachable!(),
    };
    let m = l - (chroma/2.0);
    let (r,g,b) = ((r1 + m) * 255.0, (g1 + m) * 255.0, (b1 + m) * 255.0);
    (r as u8, g as u8, b as u8)
 }
 fn hsl_to_color32(h: f32, s: f32, l: f32) -> Color32 {
    let (r, g, b) = hsl_to_rgb(h, s, l);
    Color32::from_rgb(r, g, b)
 }
--- a/plate-tool-eframe/src/transfer_menu.rs
+++ b/plate-tool-eframe/src/transfer_menu.rs
@ -0,0 +1,323 @@
 use eframe::egui;
 use plate_tool_lib::transfer_region::{self, Region, TransferRegion};
 use std::hash::{DefaultHasher, Hash, Hasher};
 use std::sync::{Arc, Mutex};
 use crate::main_state::{self, MainState};
 pub type CurrentTransferState = Arc<Mutex<CurrentTransferStateInterior>>;
 #[derive(Debug, serde::Serialize, serde::Deserialize)]
 pub struct CurrentTransferStateInterior {
    pub transfer_name: String,
    pub source_region: plate_tool_lib::transfer_region::Region,
    pub destination_region: plate_tool_lib::transfer_region::Region,
    pub source_plate: plate_tool_lib::plate::Plate,
    pub destination_plate: plate_tool_lib::plate::Plate,
    pub source_row_interleave: i8,
    pub source_column_interleave: i8,
    pub destination_row_interleave: i8,
    pub destination_column_interleave: i8,
    pub volume: f32,
    #[serde(skip)]
    transfer_hash: Option<u64>,
    #[serde(skip)]
    source_wells: Option<Vec<plate_tool_lib::Well>>,
    #[serde(skip)]
    destination_wells: Option<Vec<plate_tool_lib::Well>>,
 }
 impl Default for CurrentTransferStateInterior {
    fn default() -> Self {
        Self {
            transfer_name: String::default(),
            source_region: plate_tool_lib::transfer_region::Region::Point(plate_tool_lib::Well {
                row: 1,
                col: 1,
            }),
            destination_region: plate_tool_lib::transfer_region::Region::Point(
                plate_tool_lib::Well { row: 1, col: 1 },
            ),
            source_plate: plate_tool_lib::plate::SOURCE_W96,
            destination_plate: plate_tool_lib::plate::DESTINATION_W96,
            source_row_interleave: 1,
            source_column_interleave: 1,
            destination_row_interleave: 1,
            destination_column_interleave: 1,
            volume: 5.0,
            transfer_hash: None,
            source_wells: None,
            destination_wells: None,
        }
    }
 }
 impl CurrentTransferStateInterior {
    pub fn get_source_wells(&mut self) -> Box<[plate_tool_lib::Well]> {
        if self.source_wells.is_none() {
            self.recalulate_wells();
        }
        self.recalculate_wells_if_needed();
        self.source_wells
            .clone()
            .expect("Source wells must have been calculated by here.")
            .into_boxed_slice()
    }
    pub fn get_destination_wells(&mut self) -> Box<[plate_tool_lib::Well]> {
        if self.destination_wells.is_none() {
            self.recalulate_wells();
        }
        self.recalculate_wells_if_needed();
        self.destination_wells
            .clone()
            .expect("Destination wells must have been calculated by here.")
            .into_boxed_slice()
    }
    fn recalculate_wells_if_needed(&mut self) {
        if self.transfer_hash.is_none() {
            self.recalulate_wells();
        }
        if self.transfer_hash.unwrap() != self.calculate_hash() {
            self.recalulate_wells();
        }
    }
    fn recalulate_wells(&mut self) {
        let tr = self.generate_transfer_region();
        self.source_wells = Some(tr.get_source_wells());
        self.destination_wells = Some(tr.get_destination_wells());
        self.transfer_hash = Some(self.calculate_hash());
    }
    fn calculate_hash(&self) -> u64 {
        let mut hasher = DefaultHasher::new();
        self.generate_transfer_region().hash(&mut hasher);
        hasher.finish()
    }
    fn generate_transfer_region(&self) -> TransferRegion {
        TransferRegion {
            source_plate: self.source_plate,
            source_region: self.source_region.clone(),
            dest_plate: self.destination_plate,
            dest_region: self.destination_region.clone(),
            interleave_source: (self.source_row_interleave, self.source_column_interleave),
            interleave_dest: (
                self.destination_row_interleave,
                self.destination_column_interleave,
            ),
        }
    }
    pub fn try_new_from_main_state_transfer(ms: &MainState) -> Option<Self> {
        let transfer_id = ms.get_current_transfer_uuid();
        let transfer = ms
            .transfers
            .iter()
            .find(|x| Some(x.get_uuid()) == transfer_id);
        if let Some(transfer) = transfer {
            let volume: f32 = match transfer.volume {
                plate_tool_lib::transfer_volume::TransferVolume::Single(x) => x,
                plate_tool_lib::transfer_volume::TransferVolume::WellMap(_) => {
                    log::warn!("COOL BUG: I genuinely don't know when this variant is used and honestly assume that it just never is constructed! Anyway, here's main state:\n{:?}", ms);
                    unreachable!("It better not!");
                }
                _ => unreachable!(),
            };
            return Some(Self {
                transfer_name: transfer.name.clone(),
                source_region: transfer.transfer_region.source_region.clone(),
                destination_region: transfer.transfer_region.dest_region.clone(),
                source_plate: transfer.transfer_region.source_plate,
                destination_plate: transfer.transfer_region.dest_plate,
                source_row_interleave: transfer.transfer_region.interleave_source.0,
                source_column_interleave: transfer.transfer_region.interleave_source.1,
                destination_row_interleave: transfer.transfer_region.interleave_dest.0,
                destination_column_interleave: transfer.transfer_region.interleave_dest.1,
                volume,
                source_wells: None,
                destination_wells: None,
                transfer_hash: None,
            });
        }
        None
    }
    pub fn convert_to_transfer(&self, ms: &MainState) -> Option<plate_tool_lib::transfer::Transfer> {
        let source_plate_uuid = ms.get_current_source_uuid()?;
        let destination_plate_uuid = ms.get_current_destination_uuid()?;
        let source_plate_instance = ms.source_plates.iter().find(|x| x.get_uuid() == source_plate_uuid)?;
        let destination_plate_instance = ms.destination_plates.iter().find(|x| x.get_uuid() == destination_plate_uuid)?;
        let transfer = Some(plate_tool_lib::transfer::Transfer::new(
            source_plate_instance.clone(),
            destination_plate_instance.clone(),
            self.generate_transfer_region(),
            self.transfer_name.clone(),
        ));
        transfer.map(|mut x| {x.volume = plate_tool_lib::transfer_volume::TransferVolume::Single(self.volume); x})
    }
 }
 #[derive(Debug)]
 pub struct TransferMenuState {
    pub source_region_string: String,
    pub destination_region_string: String,
 }
 impl Default for TransferMenuState {
    fn default() -> Self {
        TransferMenuState {
            source_region_string: String::new(),
            destination_region_string: String::new(),
        }
    }
 }
 impl TransferMenuState {
    fn new_from_cts(cts: &CurrentTransferState) -> Self {
        let cts = cts.lock().unwrap();
        let source_region_string = cts.source_region.to_string();
        let destination_region_string = cts.destination_region.to_string();
        TransferMenuState {
            source_region_string,
            destination_region_string,
        }
    }
 }
 pub fn transfer_menu(
    ui: &mut egui::Ui,
    state: &CurrentTransferState,
    ui_state: &mut TransferMenuState,
    main_state: &mut MainState,
 ) {
    // Can we reduce the length of this lock pls
    let cts = state;
    let mut state = state.lock().unwrap();
    ui.horizontal(|ui| {
        ui.add(egui::Label::new("Name"));
        ui.add(
            egui::TextEdit::singleline(&mut state.transfer_name)
                .hint_text("Transfer Name")
                .horizontal_align(egui::Align::Center),
        );
    });
    ui.horizontal(|ui| {
        ui.add(egui::Label::new("Source Region"));
        let resp = ui.add(
            egui::TextEdit::singleline(&mut ui_state.source_region_string)
                .hint_text("Source Region")
                .char_limit(9)
                .horizontal_align(egui::Align::Center),
        );
        if resp.lost_focus() && ui.input(|i| i.key_pressed(egui::Key::Enter)) {
            if let Some(new_region) = Region::try_parse_str(&ui_state.source_region_string) {
                state.source_region = new_region;
            } else {
                log::warn!("Invalid source region entered.")
            }
        }
        if !resp.has_focus() && !resp.lost_focus() {
            ui_state.source_region_string = state.source_region.to_string();
        }
    });
    ui.end_row();
    ui.horizontal(|ui| {
        ui.add(egui::Label::new("Destination Region"));
        let resp = ui.add(
            egui::TextEdit::singleline(&mut ui_state.destination_region_string)
                .hint_text("Destination Region")
                .char_limit(9)
                .horizontal_align(egui::Align::Center),
        );
        if resp.lost_focus() && ui.input(|i| i.key_pressed(egui::Key::Enter)) {
            if let Some(new_region) = Region::try_parse_str(&ui_state.destination_region_string) {
                state.destination_region = new_region;
            } else {
                log::warn!("Invalid destination region entered.")
            }
        }
        if !resp.has_focus() {
            ui_state.destination_region_string = state.destination_region.to_string();
        }
    });
    ui.vertical(|ui| {
        ui.label("Source Interleave");
        ui.horizontal(|ui| {
            ui.label("Row: ");
            ui.add(
                egui::DragValue::new(&mut state.source_row_interleave)
                    .fixed_decimals(0)
                    .range(1..=30)
                    .speed(0.1),
            );
            ui.label("Col: ");
            ui.add(
                egui::DragValue::new(&mut state.source_column_interleave)
                    .fixed_decimals(0)
                    .range(1..=30)
                    .speed(0.1),
            );
        });
    });
    ui.vertical(|ui| {
        ui.label("Destination Interleave");
        ui.horizontal(|ui| {
            ui.label("Row: ");
            ui.add(
                egui::DragValue::new(&mut state.destination_row_interleave)
                    .fixed_decimals(0)
                    .range(0..=30)
                    .speed(0.1),
            );
            ui.label("Col: ");
            ui.add(
                egui::DragValue::new(&mut state.destination_column_interleave)
                    .fixed_decimals(0)
                    .range(0..=30)
                    .speed(0.1),
            );
        });
    });
    ui.horizontal(|ui| {
        if ui.button("Save").clicked() {
            if let Some(transfer_uuid) = main_state.get_current_transfer_uuid() {
                log::info!("should change transfer");
                if let Some(mut transfer) = main_state.transfers.iter_mut().find(|x| x.id == transfer_uuid) {
                    transfer.transfer_region = state.generate_transfer_region();
                    transfer.name = state.transfer_name.clone();
                    main_state.transfer_region_cache.invalidate(&transfer);
                }
            } else { // Need to make a new transfer
                if state.transfer_name.is_empty() {
                    state.transfer_name = "New Transfer".to_string();
                }
                let new_transfer = state.convert_to_transfer(main_state);
                log::info!("{:?}", new_transfer);
                if let Some(new_transfer) = new_transfer {
                    main_state.transfers.push(new_transfer);
                    let new_transfer = main_state.transfers.last()
                    .expect("Cannot be empty, just added a transfer");
                    main_state.transfer_region_cache.add_overwrite(new_transfer);
                    main_state.set_current_transfer(new_transfer.id);
                }
            }
        }
        if ui.button("New").clicked() {
            *state = CurrentTransferStateInterior::default();
            set_plates(main_state, &mut state);
            main_state.set_no_current_transfer();
        }
    });
 }
 fn set_plates(ms: &MainState, cts: &mut CurrentTransferStateInterior) {
    if let Some(source_plate) = ms.get_current_source_plateinstance() {
        cts.source_plate = source_plate.plate;
    }
    if let Some(destination_plate) = ms.get_current_destination_plateinstance() {
        cts.destination_plate = destination_plate.plate;
    }
 }
--- a/plate-tool-eframe/src/tree.rs
+++ b/plate-tool-eframe/src/tree.rs
@ -0,0 +1,185 @@
 use eframe::egui::{self, text_selection::visuals, NumExt};
 use crate::{
    main_state::MainState,
    modals::ModalState,
    transfer_menu::{CurrentTransferState, CurrentTransferStateInterior},
 };
 use std::sync::LazyLock;
 fn tree_label(
    ui: &mut egui::Ui,
    ms: &MainState,
    modal_state: &mut ModalState,
    name: &str,
    uuid: plate_tool_lib::uuid::Uuid,
    selected: bool,
 ) -> (Option<plate_tool_lib::uuid::Uuid>, bool) {
    let button_padding = ui.spacing().button_padding;
    let total_extra = button_padding + button_padding;
    let wrap_width = ui.available_width() - total_extra.x;
    let galley =
        egui::WidgetText::from(name).into_galley(ui, None, wrap_width, egui::TextStyle::Button);
    let desired_size = {
        let mut desired_size = total_extra + galley.size();
        desired_size.y = desired_size.y.at_least(ui.spacing().interact_size.y);
        desired_size
    };
    let (rect, response) = ui.allocate_at_least(desired_size, egui::Sense::click());
    let text_pos = ui
        .layout()
        .align_size_within_rect(galley.size(), rect.shrink2(button_padding))
        .min;
    let visuals = ui.style().interact_selectable(&response, selected);
    if selected || response.hovered() {
        let rect = rect.expand(visuals.expansion);
        ui.painter().rect(
            rect,
            visuals.rounding,
            visuals.weak_bg_fill,
            visuals.bg_stroke,
        );
    }
    ui.painter().galley(text_pos, galley, visuals.text_color());
    if response.clicked() {
        return (Some(uuid), false);
    }
    if response.double_clicked() {
        return (None, true);
    }
    (None, false)
 }
 pub fn tree(
    ui: &mut egui::Ui,
    ms: &mut MainState,
    cts: &CurrentTransferState,
    modal_state: &mut ModalState,
 ) {
    // Add all source plates
    ui.vertical(|ui| {
        ui.heading("Source Plates");
        let mut new_uuid: Option<plate_tool_lib::uuid::Uuid> = None;
        for (name, uuid) in ms.source_plates.iter().map(|x| (&x.name, x.get_uuid())) {
            let (potential_new_uuid, dbl_clicked) = tree_label(
                ui,
                ms,
                modal_state,
                name,
                uuid,
                ms.get_current_source_uuid().is_some_and(|x| x == uuid),
            );
            if potential_new_uuid.is_some() {
                new_uuid = potential_new_uuid;
            }
            if dbl_clicked {
                let pi = ms.get_source_by_uuid(uuid);
                if let Some(pi) = pi {
                    crate::modals::open_edit_plate_modal_plateinstance(modal_state, &pi);
                }
            }
        }
        if let Some(uuid) = new_uuid {
            let current_source_uuid = ms.get_current_source_uuid();
            if current_source_uuid.is_some_and(|x| x != uuid) || current_source_uuid.is_none() {
                ms.set_current_source(uuid);
                ms.set_no_current_transfer();
                if let Some(mut cts) = cts.lock().ok() {
                    *cts = CurrentTransferStateInterior::default();
                }
                set_plates(ms, cts);
            }
        }
    });
    // Add all destination plates
    ui.vertical(|ui| {
        ui.heading("Destination Plates");
        let mut new_uuid: Option<plate_tool_lib::uuid::Uuid> = None;
        for (name, uuid) in ms
            .destination_plates
            .iter()
            .map(|x| (&x.name, x.get_uuid()))
        {
            let (potential_new_uuid, dbl_clicked) = tree_label(
                ui,
                ms,
                modal_state,
                name,
                uuid,
                ms.get_current_destination_uuid().is_some_and(|x| x == uuid),
            );
            if potential_new_uuid.is_some() {
                new_uuid = potential_new_uuid;
            }
            if dbl_clicked {
                let pi = ms.get_destination_by_uuid(uuid);
                if let Some(pi) = pi {
                    crate::modals::open_edit_plate_modal_plateinstance(modal_state, &pi);
                }
            }
        }
        if let Some(uuid) = new_uuid {
            let current_destination_uuid = ms.get_current_destination_uuid();
            if current_destination_uuid.is_some_and(|x| x != uuid)
                || current_destination_uuid.is_none()
            {
                ms.set_current_destination(uuid);
                ms.set_no_current_transfer();
                if let Some(mut cts) = cts.lock().ok() {
                    *cts = CurrentTransferStateInterior::default();
                    cts.destination_plate = ms
                        .get_current_destination_plateinstance()
                        .expect("Just set destination")
                        .plate;
                }
                set_plates(ms, cts);
                log::warn!(
                    "{:?}\n{:?}",
                    cts,
                    ms.get_current_destination_plateinstance()
                );
            }
        }
    });
    // Add all transfers
    ui.vertical(|ui| {
        ui.heading("Transfers");
        let mut new_uuid: Option<plate_tool_lib::uuid::Uuid> = None;
        for (name, uuid) in ms.transfers.iter().map(|x| (&x.name, x.get_uuid())) {
            let (potential_new_uuid, _) = tree_label(
                ui,
                ms,
                modal_state,
                name,
                uuid,
                ms.get_current_transfer_uuid().is_some_and(|x| x == uuid),
            );
            if potential_new_uuid.is_some() {
                new_uuid = potential_new_uuid;
            }
        }
        if let Some(uuid) = new_uuid {
            ms.set_current_transfer(uuid);
            if let Some(new_cts) =
                CurrentTransferStateInterior::try_new_from_main_state_transfer(ms)
            {
                *cts.lock().unwrap() = new_cts;
            }
            set_plates(ms, cts);
        }
    });
 }
 fn set_plates(ms: &MainState, cts: &CurrentTransferState) {
    if let Some(mut cts) = cts.lock().ok() {
        if let Some(source_plate) = ms.get_current_source_plateinstance() {
            cts.source_plate = source_plate.plate;
        }
        if let Some(destination_plate) = ms.get_current_destination_plateinstance() {
            cts.destination_plate = destination_plate.plate;
        }
    }
 }
--- a/plate-tool-lib/src/lib.rs
+++ b/plate-tool-lib/src/lib.rs
@ -3,8 +3,11 @@ pub mod plate;
 pub mod plate_instances;
 pub mod transfer;
 pub mod transfer_region;
 pub mod transfer_region_cache;
 pub mod transfer_volume;
 pub mod util;
 mod well;
 pub use well::Well;
 pub use uuid;
--- a/plate-tool-lib/src/plate.rs
+++ b/plate-tool-lib/src/plate.rs
@ -1,6 +1,15 @@
 use serde::{Deserialize, Serialize};
-#[derive(PartialEq, Eq, Default, Clone, Copy, Serialize, Deserialize, Debug)]
+pub const SOURCE_W96: Plate = Plate {
    plate_type: PlateType::Source,
    plate_format: PlateFormat::W96,
 };
 pub const DESTINATION_W96: Plate = Plate {
    plate_type: PlateType::Destination,
    plate_format: PlateFormat::W96,
 };
 #[derive(PartialEq, Eq, Default, Clone, Copy, Serialize, Deserialize, Debug, Hash)]
 pub struct Plate {
    pub plate_type: PlateType,
    pub plate_format: PlateFormat,
@ -19,7 +28,7 @@ impl Plate {
    }
 }
-#[derive(PartialEq, Eq, Clone, Copy, Serialize, Deserialize, Debug)]
+#[derive(PartialEq, Eq, Clone, Copy, Serialize, Deserialize, Debug, Hash)]
 pub enum PlateType {
    Source,
    Destination,
@ -30,7 +39,7 @@ impl Default for PlateType {
    }
 }
-#[derive(PartialEq, Eq, Clone, Copy, Serialize, Deserialize, Debug)]
+#[derive(PartialEq, Eq, Clone, Copy, Serialize, Deserialize, Debug, Hash)]
 pub enum PlateFormat {
    W6,
    W12,
@ -105,4 +114,10 @@ impl PlateFormat {
            PlateFormat::W3456 => (48, 72),
        }
    }
    pub fn rows(&self) -> u8 {
        self.size().0
    }
    pub fn columns(&self) -> u8 {
        self.size().1
    }
 }
--- a/plate-tool-lib/src/transfer_region.rs
+++ b/plate-tool-lib/src/transfer_region.rs
@ -1,9 +1,16 @@
 use serde::{Deserialize, Serialize};
 use regex::Regex;
 use super::plate::Plate;
 use crate::plate::PlateType;
 use crate::util;
 use crate::Well;
-#[derive(Clone, PartialEq, Eq, Serialize, Deserialize, Debug)]
+use std::fmt;
 use std::sync::LazyLock;
 #[derive(Clone, PartialEq, Eq, Serialize, Deserialize, Debug, Hash)]
 pub struct CustomRegion {
    src: Vec<Well>,
    dest: Vec<Well>,
@ -15,7 +22,7 @@ impl CustomRegion {
    }
 }
-#[derive(Clone, PartialEq, Eq, Serialize, Deserialize, Debug)]
+#[derive(Clone, PartialEq, Eq, Serialize, Deserialize, Debug, Hash)]
 pub enum Region {
    Rect(Well, Well),
    Point(Well),
@ -26,6 +33,28 @@ impl Default for Region {
        Region::Point(Well { row: 1, col: 1 })
    }
 }
 impl Display for Region {
    fn fmt(&self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
        match self {
            Region::Rect(ul, br) => {
                write!(
                    f,
                    "{}{}:{}{}",
                    util::num_to_letters(ul.col).unwrap(),
                    ul.row,
                    util::num_to_letters(br.col).unwrap(),
                    br.row
                )
            }
            Region::Point(w) => {
                write!(f, "{}{}", util::num_to_letters(w.col).unwrap(), w.row)
            }
            Region::Custom(..) => {
                write!(f, "Custom Region")
            }
        }
    }
 }
 impl TryFrom<Region> for (Well, Well) {
    type Error = &'static str;
    fn try_from(region: Region) -> Result<Self, Self::Error> {
@ -53,9 +82,76 @@ impl Region {
            dest: dest_pts,
        })
    }
    pub fn new_from_wells(w1: Well, w2: Option<Well>) -> Self {
        if w2.is_none() {
            Self::Point(w1)
        } else {
            let w2 = w2.unwrap();
            let (w1, w2) = standardize_rectangle(&w1, &w2);
            Self::Rect(w1, w2)
        }
    }
-#[derive(PartialEq, Eq, Clone, Serialize, Deserialize, Debug)]
+    pub fn try_parse_str(input: &str) -> Option<Self> {
        static POINT_REGEX: LazyLock<Regex> =
            LazyLock::new(|| Regex::new(r"([A-Z,a-z]+)(\d+)").unwrap());
        static RECT_REGEX: LazyLock<Regex> =
            LazyLock::new(|| Regex::new(r"([A-Z,a-z]+)(\d+):([A-Z,a-z]+)(\d+)").unwrap());
        log::info!("{:?}", input);
        if let Some(captures) = RECT_REGEX.captures(input) {
            if let (Some(col1), Some(row1), Some(col2), Some(row2)) = (
                crate::util::letters_to_num(&captures[1]),
                captures[2].parse::<u8>().ok(),
                crate::util::letters_to_num(&captures[3]),
                captures[4].parse::<u8>().ok(),
            ) {
                return Some(Region::Rect(
                    Well {
                        row: row1,
                        col: col1,
                    },
                    Well {
                        row: row2,
                        col: col2,
                    },
                ));
            } else {
                return None;
            }
        } else if let Some(captures) = POINT_REGEX.captures(input) {
            if let (Some(col), Some(row)) = (
                crate::util::letters_to_num(&captures[1]),
                captures[2].parse::<u8>().ok(),
            ) {
                return Some(Region::Point(Well { row, col }));
            } else {
                return None;
            }
        } else {
            None
        }
    }
    pub fn contains_well(&self, w: &Well, pt: Option<PlateType>) -> bool {
        match self {
            Self::Point(x) => x == w,
            Self::Rect(ul, br) => {
                w.row <= br.row && w.row >= ul.row && w.col <= br.col && w.col >= ul.col
            }
            Self::Custom(xs) => match pt {
                Some(PlateType::Source) => xs.src.contains(w),
                Some(PlateType::Destination) => xs.dest.contains(w),
                None => {
                    unreachable!("Cannot check if custom contains well without knowing the type")
                }
            },
        }
    }
 }
 #[derive(PartialEq, Eq, Clone, Serialize, Deserialize, Debug, Hash)]
 pub struct TransferRegion {
    pub source_plate: Plate,
    pub source_region: Region, // Even if it is just a point, we don't want corners.
@ -154,24 +250,39 @@ impl TransferRegion {
        // Non-replicate transfers:
        match &self.dest_region {
-            Region::Point(Well { row: x, col: y }) => {
+            Region::Point(dest_point) => {
-                Box::new(move |Well { row: i, col: j }| {
+                // Breaking from form somewhat, we really should return an entirely different
-                    if source_wells.contains(&Well { row: i, col: j }) {
+                // function if a point-dest can't fit the whole source.
                // If the bottom-right well of the source won't fit in the dest,
                // we can abort.
                let source_bottom_right = match self.source_region {
                    Region::Point(x) => x,
                    Region::Rect(w1, w2) => standardize_rectangle(&w1, &w2).1,
                    Region::Custom(_) => unreachable!("A point destination region cannot be paired with a custom source destination?"),
                };
                let bottom_right_mapped = Self::point_destination_region_calc(
                    source_bottom_right,
                    source_ul,
                    il_source,
                    il_dest,
                    *dest_point,
                );
                if bottom_right_mapped.row > self.dest_plate.plate_format.rows()
                    || bottom_right_mapped.col > self.dest_plate.plate_format.columns()
                {
                    return Box::new(|_| None);
                }
                Box::new(move |input| {
                    if source_wells.contains(&input) {
                        // Validity here already checked by self.validate()
-                        Some(vec![Well {
+                        Some(vec![Self::point_destination_region_calc(
-                            row: x + i
+                            input,
-                                .checked_sub(source_ul.row)
+                            source_ul,
-                                .expect("Point cannot have been less than UL")
+                            il_source,
-                                .checked_div(il_source.0.unsigned_abs())
+                            il_dest,
-                                .expect("Source interleave cannot be 0")
+                            *dest_point,
-                                .mul(il_dest.0.unsigned_abs()),
+                        )])
                            col: y + j
                                .checked_sub(source_ul.col)
                                .expect("Point cannot have been less than UL")
                                .checked_div(il_source.1.unsigned_abs())
                                .expect("Source interleave cannot be 0")
                                .mul(il_dest.1.unsigned_abs()),
                        }])
                    } else {
                        None
                    }
@ -233,8 +344,10 @@ impl TransferRegion {
                        let j = j
                            .saturating_sub(s_ul.col)
                            .saturating_div(il_source.1.unsigned_abs());
-                        let checked_il_dest = (u8::max(il_dest.0.unsigned_abs(), 1u8),
+                        let checked_il_dest = (
-                                                u8::max(il_dest.1.unsigned_abs(), 1u8));
+                            u8::max(il_dest.0.unsigned_abs(), 1u8),
                            u8::max(il_dest.1.unsigned_abs(), 1u8),
                        );
                        let row_modulus = number_used_src_wells.0 * checked_il_dest.0;
                        let column_modulus = number_used_src_wells.1 * checked_il_dest.1;
@ -256,12 +369,12 @@ impl TransferRegion {
                                .filter(|Well { row: x, col: y }| {
                                    // How many times have we replicated? < How many are we allowed
                                    // to replicate?
-                                    x.checked_sub(d_ul.row).unwrap().div_euclid(
+                                    x.checked_sub(d_ul.row).unwrap().div_euclid(row_modulus)
-                                        row_modulus
+                                        < count.0
-                                    ) < count.0
+                                        && y.checked_sub(d_ul.col)
-                                        && y.checked_sub(d_ul.col).unwrap().div_euclid(
+                                            .unwrap()
-                                            column_modulus
+                                            .div_euclid(column_modulus)
-                                        ) < count.1
+                                            < count.1
                                })
                                .collect(),
                        )
@ -289,6 +402,33 @@ impl TransferRegion {
        }
    }
    fn point_destination_region_calc(
        input: Well,
        source_ul: Well,
        il_source: (i8, i8),
        il_dest: (i8, i8),
        dest_point: Well,
    ) -> Well {
        Well {
            row: dest_point.row
                + input
                    .row
                    .checked_sub(source_ul.row)
                    .expect("Point cannot have been less than UL")
                    .checked_div(il_source.0.unsigned_abs())
                    .expect("Source interleave cannot be 0")
                    .mul(il_dest.0.unsigned_abs()),
            col: dest_point.col
                + input
                    .col
                    .checked_sub(source_ul.col)
                    .expect("Point cannot have been less than UL")
                    .checked_div(il_source.1.unsigned_abs())
                    .expect("Source interleave cannot be 0")
                    .mul(il_dest.1.unsigned_abs()),
        }
    }
    pub fn validate(&self) -> Result<(), &'static str> {
        // Checks if the region does anything suspect
        //
@ -302,6 +442,12 @@ impl TransferRegion {
        let il_dest = self.interleave_dest;
        match self.source_region {
            /*
             * Note 04Jan2025:
             *  I genuinely cannot think of a reason why we should need to validate a source
             *  point region???
             *  Like, why would it *not* be in the plate?
             */
            Region::Point(_) => return Ok(()), // Should make sure it's actually in the plate, leave for
            // later
            Region::Rect(s1, s2) => {
@ -311,16 +457,15 @@ impl TransferRegion {
                }
                // Sufficient to check if the corners are in-bounds
                let source_max = self.source_plate.size();
-                if s1.row > source_max.0 || s2.row > source_max.0 {
+                if (s1.row > source_max.0 || s2.row > source_max.0) && il_dest.0 != 0 {
                    return Err("Source region is out-of-bounds! (Too tall)");
                }
-                if s1.col > source_max.1 || s2.col > source_max.1 {
+                if (s1.col > source_max.1 || s2.col > source_max.1) && il_dest.1 != 0 {
                    // log::debug!("s1.1: {}, max.1: {}", s1.1, source_max.1);
                    return Err("Source region is out-of-bounds! (Too wide)");
                }
                if il_dest == (0, 0) {
-                    return Err("Refusing to pool both dimensions in a rectangular transfer!\nPlease select a point in the destination plate.")
+                    return Err("Refusing to pool both dimensions in a rectangular transfer!\nPlease select a point in the destination plate.");
                }
            }
            Region::Custom(_) => return Ok(()),
@ -372,7 +517,7 @@ fn standardize_rectangle(c1: &Well, c2: &Well) -> (Well, Well) {
 #[cfg(debug_assertions)]
 use std::fmt;
-use std::ops::Mul;
+use std::{fmt::Display, ops::Mul};
 #[cfg(debug_assertions)] // There should be no reason to print a transfer otherwise
 impl fmt::Display for TransferRegion {
--- a/plate-tool-lib/src/transfer_region_cache.rs
+++ b/plate-tool-lib/src/transfer_region_cache.rs
@ -0,0 +1,119 @@
 use std::collections::HashMap;
 use std::sync::{Arc, Mutex};
 use crate::transfer::Transfer;
 use crate::Well;
 use uuid::Uuid;
 #[derive(Debug)]
 pub struct TransferRegionCache {
    interior: Arc<Mutex<TransferRegionCacheInterior>>,
 }
 impl Default for TransferRegionCache {
    fn default() -> Self {
        Self::new()
    }
 }
 impl TransferRegionCache {
    pub fn new() -> Self {
        TransferRegionCache {
            interior: Arc::new(Mutex::new(TransferRegionCacheInterior::new()))
        }
    }
    pub fn add_overwrite(&self, tr: &Transfer) {
        let source = tr.transfer_region.get_source_wells();
        let destination = tr.transfer_region.get_destination_wells();
        let uuid = tr.id;
        if let Ok(mut interior) = self.interior.lock() {
            interior.cache.insert(uuid, InteriorWellSlices {
                source: source.into(),
                destination: destination.into(),
            });
        }
    }
    pub fn generate_cache(&self, trs: &[Transfer]) {
        for tr in trs.iter() {
            self.add_overwrite(tr);
        }
    }
    pub fn invalidate(&self, tr: &Transfer) {
        if let Ok(mut interior) = self.interior.lock() {
            interior.cache.remove(&tr.id);
        }
    }
    pub fn get_source(&self, tr: &Transfer) -> Option<Arc<[Well]>> {
        self.get(tr, true)
    }
    pub fn get_or_calculate_source(&self, tr: &Transfer) -> Option<Arc<[Well]>> {
        if !self.has(tr) {
            self.add_overwrite(tr);
        }
        self.get_source(tr)
    }
    pub fn get_destination(&self, tr: &Transfer) -> Option<Arc<[Well]>> {
        self.get(tr, false)
    }
    pub fn get_or_calculate_destination(&self, tr: &Transfer) -> Option<Arc<[Well]>> {
        if !self.has(tr) {
            self.add_overwrite(tr);
        }
        self.get_destination(tr)
    }
    fn get(&self, tr: &Transfer, is_source: bool) -> Option<Arc<[Well]>> {
        if let Ok(interior) = self.interior.lock() {
            interior.cache.get(&tr.id).map(|x| 
                if is_source {
                    x.source.clone()
                } else {
                    x.destination.clone()
                })
        } else {
            None
        }
    }
    fn has(&self, tr: &Transfer) -> bool {
        if let Ok(interior) = self.interior.lock() {
            interior.cache.contains_key(&tr.get_uuid())
        } else {
            false
        }
    }
 }
 impl Clone for TransferRegionCache {
    fn clone(&self) -> Self {
        // Clone the interior RC without letting anyone know
        // shhhh!
        TransferRegionCache {
            interior: self.interior.clone(),
        }
    }
 }
 #[derive(Debug)]
 struct TransferRegionCacheInterior {
    cache: HashMap<Uuid, InteriorWellSlices>,
 }
 impl TransferRegionCacheInterior {
    fn new() -> Self {
        TransferRegionCacheInterior {
            cache: HashMap::new()
        }
    }
 }
 #[derive(Debug)]
 struct InteriorWellSlices {
    source: Arc<[Well]>,
    destination: Arc<[Well]>,
 }
--- a/plate-tool-lib/src/util.rs
+++ b/plate-tool-lib/src/util.rs
@ -30,6 +30,89 @@ pub fn num_to_letters(num: u8) -> Option<String> {
    Some(text.to_string())
 }
 //
 // Palettes moved from pt-web
 //
 // Sources:
 // https://iquilezles.org/articles/palettes/
 // http://dev.thi.ng/gradients/
 #[derive(Clone, Copy, PartialEq, Debug)]
 pub struct ColorPalette {
    a: [f64; 3],
    b: [f64; 3],
    c: [f64; 3],
    d: [f64; 3],
 }
 impl ColorPalette {
    pub fn _new(a: [f64; 3], b: [f64; 3], c: [f64; 3], d: [f64; 3]) -> Self {
        ColorPalette { a, b, c, d }
    }
    pub fn get(&self, t: f64) -> [f64; 3] {
        [
            (self.a[0] + self.b[0] * f64::cos(std::f64::consts::TAU * (self.c[0] * t + self.d[0])))
                * 255.0,
            (self.a[1] + self.b[1] * f64::cos(std::f64::consts::TAU * (self.c[1] * t + self.d[1])))
                * 255.0,
            (self.a[2] + self.b[2] * f64::cos(std::f64::consts::TAU * (self.c[2] * t + self.d[2])))
                * 255.0,
        ]
    }
    #[allow(dead_code)] // Preserve old implementation for reference
    fn get_u8(&self, t: u8) -> [f64; 3] {
        assert!(t > 0, "t must be greater than zero!");
        self.get((2f64.powi(-(t.ilog2() as i32))) * (t as f64 + 0.5f64) - 1.0f64)
    }
    // pub fn get_uuid(&self, t: uuid::Uuid) -> [f64; 3] {
    //     // self.get(t.as_u128() as f64 / (u128::MAX) as f64)
    //     let mut r = SmallRng::seed_from_u64(t.as_u128() as u64);
    //     self.get(r.gen_range(0.0..1.0f64))
    // }
    pub fn get_ordered(&self, t: uuid::Uuid, ordered_uuids: &[uuid::Uuid])
        -> [f64; 3] {
        let index = ordered_uuids.iter().position(|&x| x == t).expect("uuid must be in list of uuids") + 1;
        self.get(Self::space_evenly(index))
    }
    pub fn get_linear(&self, t: f64, max: f64) -> [f64; 3] {
        let scaled = t / max;
        self.get(scaled)
    }
    fn space_evenly(x: usize) -> f64 {
        let e: usize = (x.ilog2() + 1) as usize;
        let d: usize = 2usize.pow(e as u32);
        let n: usize = (2*x + 1) % d;
        (n as f64) / (d as f64)
    }
 }
 #[non_exhaustive]
 pub struct Palettes;
 #[allow(dead_code)]
 impl Palettes {
    pub const RAINBOW: ColorPalette = ColorPalette {
        a: [0.500, 0.500, 0.500],
        b: [0.700, 0.700, 0.700],
        c: [0.800, 0.800, 0.800],
        d: [0.000, 0.333, 0.667],
    };
    pub const YELLOW_PINK: ColorPalette = ColorPalette {
        a: [0.500, 0.500, 0.320],
        b: [0.500, 0.500, 0.500],
        c: [0.100, 0.500, 0.360],
        d: [0.000, 0.000, 0.650],
    };
 }
 #[cfg(test)]
 mod tests {
    use super::{letters_to_num, num_to_letters};
Author	SHA1	Message	Date
Emilia Allison	5e70a17a00	pretty	2025-01-12 22:02:37 -05:00
Emilia Allison	7295115506	Toggle values instead	2025-01-12 19:50:10 -05:00
Emilia Allison	4a9bec7d5d	Volume heatmap, checkboxes	2025-01-12 19:48:08 -05:00
Emilia Allison	418bf4a79e	Display options for plate	2025-01-12 19:22:57 -05:00
Emilia Allison	e6d80ab8a3	Edit plates	2025-01-12 17:25:46 -05:00
Emilia Allison	1d2028959d	lib fix: swapped row/col on parse string	2025-01-12 14:59:14 -05:00
Emilia Allison	26526bb249	lib fix: Disable height checking for pool direction	2025-01-12 12:03:28 -05:00
Emilia Allison	fcbfa6e544	New plates, plate switching	2025-01-12 12:00:39 -05:00
Emilia Allison	ff60439dd5	Build for web	2025-01-12 12:00:23 -05:00
Emilia Allison	619f9594cf	lib fix: do not permit out-of-plate destinations	2025-01-11 09:52:25 -05:00
Emilia Allison	2ea2963b22	Edit transfers	2025-01-11 09:51:52 -05:00
Emilia Allison	949822f26c	no direct slice indexing	2025-01-04 20:23:09 -05:00
Emilia Allison	453ad9ed35	0 indexing is a blight	2025-01-04 20:07:19 -05:00
Emilia Allison	d296854580	evil mass commit please stop doing thisssss	2025-01-04 19:22:53 -05:00
Emilia Allison	ce0e1f2743	Disable Jenkinsfile this won't (???) build correctly right now anyway	2025-01-02 21:23:47 -05:00
Emilia Allison	bbf420080d	big eframe moment Gitea Scan/plate-tool/pipeline/head This commit looks good Details perhaps a "Draw the rest of the owl" commit	2025-01-02 21:21:52 -05:00
Emilia Allison	b34b02af89	Init function for the transfer region cache	2025-01-02 21:21:34 -05:00
Emilia Allison	8bf11eecca	Useful impls on transfer_region	2025-01-02 21:21:17 -05:00
Emilia Allison	6b7d657760	Convenience const plate types	2025-01-02 21:20:02 -05:00
Emilia Allison	5b45e50f4f	Add Hash impl to lib plate types	2025-01-02 21:19:51 -05:00
Emilia Allison	438bd6b26c	Export uuid from lib	2025-01-02 21:19:18 -05:00
Emilia Allison	12a8e82015	Transfer region cache draft	2025-01-01 15:44:10 -05:00
Emilia Allison	3982d1a7a1	Move palettes to lib	2025-01-01 14:38:07 -05:00
Emilia Allison	2b1792c2ae	eframe work	2025-01-01 14:37:56 -05:00
Emilia Allison	dc3ef4830a	Eframe plate big if true?	2024-12-24 21:54:36 -05:00
		`@ -0,0 +1,2 @@`
							`[build]`
							`target = "x86_64-unknown-linux-gnu"`